Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., helix-turn-helix transcriptional regulator from Ralstonia sp. UNC404CL21Col

 Score =  114 bits (285), Expect = 2e-30
 Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 14/227 (6%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           H H   Q+ ++    +R    D+  ++PP++A+WIP G  H   +      R++Y D   
Sbjct: 38  HTHPWAQVAYSHNSVLRVQAGDTAWVVPPSRAIWIPPGIEHEVWVVEAAFLRTLYAD--- 94

Query: 94  FKCPDHIT-------MIEVNALLKALIDKMALWSWDTPQESMNNTTTLFWEEFYAAQRQT 146
              P  +T       ++EV+ LL+ LI  M +     P        TL  +E   +    
Sbjct: 95  ---PSVVTGTLAQCRVMEVSPLLRELIAAMDVRQ-PLPAAREQALATLILDELRRSAPLP 150

Query: 147 FHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQ 206
             LP+P ++R +   +++M     +    +LA  VGAS++T+ R F+ E G+S+ +W+QQ
Sbjct: 151 LDLPMPADKRLRALCERVMADPGTSLTFDALARDVGASARTLARRFRDELGVSFSQWRQQ 210

Query: 207 WRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSFI 253
             L  AI ++S+  P+++V+  LG++S SAF A F++  G +P +F+
Sbjct: 211 AVLASAIPMMSQGMPLSRVAQELGYNSQSAFSAMFRRAFGSSPSAFL 257