Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  253 bits (645), Expect = 4e-72
 Identities = 124/255 (48%), Positives = 166/255 (65%), Gaps = 1/255 (0%)

Query: 1   MAIIDQQTSFDPDRLPACVVGIAADIGNHDSGLHQHQKGQLLFAPQGCIRFALDDSICIL 60
           MA I  +  F+PD L   V+GIAA++G HDSG+HQH K QLL++  GC+RF L D+  +L
Sbjct: 1   MAFIQPEQQFNPDALDNLVIGIAAEMGEHDSGVHQHSKAQLLYSSAGCMRFNLADTQVVL 60

Query: 61  PPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHAF-KCPDHITMIEVNALLKALIDKMALW 119
           PPT+A W+P+G  H+  M NVVAYRS+YF+       PD++T+  V+ LLKALID M+ W
Sbjct: 61  PPTRAAWLPAGVIHQVTMRNVVAYRSLYFEPETVASLPDNVTIFHVDPLLKALIDTMSFW 120

Query: 120 SWDTPQESMNNTTTLFWEEFYAAQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLAN 179
            WD P+ S +N   L  EE   A  +   LPLP ++R + + KQL Q       L  +A 
Sbjct: 121 PWDKPRHSQHNAFALLIEELVNADAENLSLPLPKDKRLQSWLKQLQQQQKIPASLQEMAI 180

Query: 180 SVGASSKTVTRLFKAETGMSYQEWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIA 239
            +GAS +T++R+F  ETGM+YQ W+QQWRLL AIE L+    V QV   L FSSDSAFI+
Sbjct: 181 EIGASERTISRIFSNETGMAYQAWRQQWRLLSAIEQLAAGASVAQVGFNLQFSSDSAFIS 240

Query: 240 FFKKQTGQTPLSFIK 254
           FFK+ TG TP  + +
Sbjct: 241 FFKQYTGTTPAQYFR 255