Pairwise Alignments

Query, 392 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., MerR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  407 bits (1046), Expect = e-118
 Identities = 202/386 (52%), Positives = 278/386 (72%), Gaps = 2/386 (0%)

Query: 4   ISELAVKAGLSRTTLLYYEKLGLIRGQRLDNGYRYYNESDLQQLFLIQQLQSAGLSLKEC 63
           IS+LA K GLSR+TLLYYEK GLIRG+RLDNGYR Y+E+DLQ+L LIQ+LQ+ GL+LKEC
Sbjct: 5   ISQLAQKFGLSRSTLLYYEKQGLIRGRRLDNGYRVYSENDLQRLILIQKLQAGGLTLKEC 64

Query: 64  EECLQAKLDRTLLERRLSQLDDEIEKKVRARELLLALLGERPQRELHHSLSKHAPNAYLS 123
             CL A++D+ LL+ RL++LD +I +K  +R LL ALLGE   +  H SL+K AP A+L 
Sbjct: 65  LACLDARIDKALLQTRLAELDADIAQKQASRTLLAALLGEGDLKAWHESLTKEAPEAHLD 124

Query: 124 WLNTQGYSEKEALRLKWLSKDMNEHDIYMQDFMTVFASLQHWGPGSEQDSLKAISLMSMQ 183
           WL TQG+SEKEAL L WLSKDMNEHD +M DFM +F+ L  W PGSE D+LKA++ + + 
Sbjct: 125 WLQTQGFSEKEALHLTWLSKDMNEHDKFMADFMQIFSPLTRWAPGSEADTLKALASVPL- 183

Query: 184 NMQHILDIGCETGLSTLLLAENSSAHITAVDNEPIAIEQLEKQRQHSPWKEQISPVLGSM 243
               ILDIGC  GL+T +LA+++ A ITA+DNE  A+ +L++  QH     ++S +  SM
Sbjct: 184 TPTRILDIGCGKGLATRMLAKHTKASITAIDNEEDALTELQQHLQHRNLASRVSTLCASM 243

Query: 244 TALPFAAKSFDAIWAEGCVYIMGMENALKQWKPFLADNAILMVSDLVWLTENPKPEAQEF 303
           T +P  A S D IWAEG  YIMG+E ALK W+  L DN +L++SDLVWLT++  PEA  F
Sbjct: 244 TDIPLPAASADLIWAEGSAYIMGVEQALKSWRKLLVDNGVLVLSDLVWLTDDKAPEAVAF 303

Query: 304 WQSEYPDIQSIPSRIKLFKKLGYEVMEHFSLGIDAWQNYWLPLQNRVQELKLRLTNSQAL 363
           WQ +YP + S+ +R+   +  G+EV++ FSL  +AW+++  PL  RV E+  +L  SQAL
Sbjct: 304 WQQDYPAMTSVEARMAQMQAAGFEVIDSFSLSNEAWKSFTGPLAARVDEVSEQLAGSQAL 363

Query: 364 SDIEKEIAIYERSAAKDFTYQYFVLK 389
           +++++E+ I+ R   + F YQ+FVL+
Sbjct: 364 ANVQRELGIFSRFLGQ-FGYQFFVLQ 388