Pairwise Alignments

Query, 392 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., MerR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  622 bits (1604), Expect = 0.0
 Identities = 304/390 (77%), Positives = 345/390 (88%)

Query: 1   MYLISELAVKAGLSRTTLLYYEKLGLIRGQRLDNGYRYYNESDLQQLFLIQQLQSAGLSL 60
           MYLISELA KAG+SRTTLLYYEKLGLI GQRLDNGYRYY+E+DLQ+L LIQQLQSAGLSL
Sbjct: 1   MYLISELAAKAGISRTTLLYYEKLGLINGQRLDNGYRYYSENDLQRLLLIQQLQSAGLSL 60

Query: 61  KECEECLQAKLDRTLLERRLSQLDDEIEKKVRARELLLALLGERPQRELHHSLSKHAPNA 120
           KECE+CL AKL R+LLE RL+QL+ EI+KK+ ARELLLALLGERPQRELHHSLS+ APNA
Sbjct: 61  KECEQCLDAKLSRSLLENRLTQLNHEIDKKIHARELLLALLGERPQRELHHSLSQSAPNA 120

Query: 121 YLSWLNTQGYSEKEALRLKWLSKDMNEHDIYMQDFMTVFASLQHWGPGSEQDSLKAISLM 180
           YL+WL+TQGYSEKEALRLKWLSKDMNEH+ YM+DFMTVFA+L+ WGPGS +DSLKAISLM
Sbjct: 121 YLNWLSTQGYSEKEALRLKWLSKDMNEHESYMKDFMTVFATLERWGPGSHKDSLKAISLM 180

Query: 181 SMQNMQHILDIGCETGLSTLLLAENSSAHITAVDNEPIAIEQLEKQRQHSPWKEQISPVL 240
           S Q M  ILDIGC TG STLLLA+NS AHITAVDNEPIAIEQL K+ Q++   E+ISPV 
Sbjct: 181 SPQTMTDILDIGCGTGTSTLLLADNSIAHITAVDNEPIAIEQLNKKIQNAQLHERISPVC 240

Query: 241 GSMTALPFAAKSFDAIWAEGCVYIMGMENALKQWKPFLADNAILMVSDLVWLTENPKPEA 300
            SMT LPF AKSFDAIWAEGCVYIMGMENALKQWKP L DN +LMVSDLVWLT++P  E 
Sbjct: 241 ASMTELPFQAKSFDAIWAEGCVYIMGMENALKQWKPLLKDNGVLMVSDLVWLTDSPDEET 300

Query: 301 QEFWQSEYPDIQSIPSRIKLFKKLGYEVMEHFSLGIDAWQNYWLPLQNRVQELKLRLTNS 360
           ++FW ++YPDIQSIP R+ LFKK GY+V+EHFSLG+DAWQNYW PLQ RV+EL+  +  S
Sbjct: 301 KQFWLADYPDIQSIPKRLTLFKKHGYDVIEHFSLGVDAWQNYWQPLQGRVEELQAVMPAS 360

Query: 361 QALSDIEKEIAIYERSAAKDFTYQYFVLKL 390
           QAL DI+KEI++YERSAAKDFTYQYF+LKL
Sbjct: 361 QALLDIKKEISVYERSAAKDFTYQYFILKL 390