Pairwise Alignments

Query, 484 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 637 a.a., GAF sensor signal transduction histidine kinase from Synechococcus elongatus PCC 7942

 Score = 45.1 bits (105), Expect = 7e-09
 Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 39/220 (17%)

Query: 278 RERRFILQLLTHELRTPITSLGFTVESLRSQFDELSPKAQESLWRLMADHQRLAQLSETS 337
           R R  +  ++ HELRTP++++   +ESL ++ D  +   Q  L   + D +RL  L +  
Sbjct: 398 RTRSNLTAIIGHELRTPLSTVQVCLESLATEPDMSADLRQVMLQTALDDAERLRLLVQDF 457

Query: 338 RHYLSPSHDTMARHPAQLSDFIEHCIEGFEVELHLKH--DSI--------LALPYY---- 383
                     +  HP  L+  ++ C+      L  +H  DS+         +LP      
Sbjct: 458 LTLSRLESGRIDWHPESLA--LDECVAMAMSGLRSRHQRDSLPSIEQKLPASLPLVRVDG 515

Query: 384 -WLGLCVTNLLSNAKQHGVPPIRLTVSVVAQ---TLRIEVEDCGE----------FPSFY 429
            WL   +  LL NA +       ++++ V +    LR+ + D G           F  FY
Sbjct: 516 DWLVEVLIKLLDNACKFTSAQGHVSITAVVEGDRALRVAITDDGRGIEPDRLEAVFDRFY 575

Query: 430 QRLCKRLSRHQDTHSRPNTDNMGVGLQLVRKLITQMGGKL 469
           Q         +D   R +    G+GL + R+++ ++GG +
Sbjct: 576 Q---------EDGALRRSQGGSGLGLAICRQIVERLGGHI 606