Pairwise Alignments

Query, 484 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., Periplasmic Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score = 43.9 bits (102), Expect = 1e-08
 Identities = 47/220 (21%), Positives = 94/220 (42%), Gaps = 30/220 (13%)

Query: 279 ERRFILQLLTHELRTPITSLGFTVESLRSQFDELSPKAQESLWRLMADHQRLAQLSETSR 338
           +R  +L  ++H+LRTP+T +   +  +         + +E    L  D   +A++     
Sbjct: 265 QRTEMLAGVSHDLRTPLTRMRLQLALM---------EGEEGTVELTED---IAEMERMVE 312

Query: 339 HYLS-----PSHDTMARHPAQLSDFIEHCI-----EGFEVELHLKHDSILALPYYWLGLC 388
            YL+      + +T+A     ++D ++  +      G  ++LH +    + L    +  C
Sbjct: 313 GYLAFARGEGTEETVA---TCITDLVDEVVGRMRRNGARIDLHTEQPLTVPLKPNAMERC 369

Query: 389 VTNLLSNAKQHGVPPIRLTVSVVAQTLRIEVEDCGE-FPSFYQRLCKRLSRHQDTHSRPN 447
           + N++ NA + G   I + V V    + + V+D G   P   +    R     ++   P 
Sbjct: 370 LANIIGNAHRFG-QHIAVRVGVRDGHVEVVVDDDGPGIPPERREDVFRAFFRIESSRNPR 428

Query: 448 TDNMGVGLQLVRKLITQMGGKLVIRRHP---TRCILELPL 484
           T   G+GL + R ++  MGG + +   P    R  + LP+
Sbjct: 429 TGGTGLGLTIARDVVRAMGGDIFLENSPFGGLRARIRLPM 468