Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., DNA-binding response regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  117 bits (294), Expect = 1e-31
 Identities = 76/221 (34%), Positives = 122/221 (55%), Gaps = 12/221 (5%)

Query: 8   MKRILLIEDDTLLGQGLRDYLHDHGYACEWVTQSQQVEKHWFSTD--LVILDRQLHDGDS 65
           M RIL IEDD +  + +   L  +G   +WV   ++  +   S D  L+ LDR L + D 
Sbjct: 1   MNRILTIEDDAVTAREIVAELTRNGLDVDWVDNGREGLERAVSGDYDLITLDRMLPELDG 60

Query: 66  LKHLPHW-LMLKALPVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQLRPL 124
           L  +     M  A P+++++A  +V++R+ GL+AG  DY+ KPF+  E+ AR+E  LR  
Sbjct: 61  LVIVTTLRTMGVATPILMISALSDVDERVRGLRAGGDDYLTKPFATDEMAARVEVLLRRN 120

Query: 125 GSS-----VLSYADIVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDELLNL 179
             +     VL  AD+ +++ +R    N   + L P E++LL  L++N G++  R  +   
Sbjct: 121 NGAREPETVLRVADLELNLISREASRNGQLLSLLPTEYKLLEFLMRNSGQILSRMMIFEE 180

Query: 180 IWGYQYFPTTRTVDNHILHLRQKL--PQLD--IETLRGVGY 216
           +WGY + P T  +D HI  LR+K+  P L+  I T+RG GY
Sbjct: 181 VWGYHFDPGTNLIDVHIGRLRKKIDPPGLEPLIRTVRGSGY 221