Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., Two-component system response regulator QseB from Pseudomonas fluorescens FW300-N2E2

 Score =  138 bits (347), Expect = 9e-38
 Identities = 87/213 (40%), Positives = 118/213 (55%), Gaps = 6/213 (2%)

Query: 10  RILLIEDDTLLGQGLRDYLHDHGYACEWVTQSQQVEKHWFST--DLVILDRQLHDGDSLK 67
           R+LLIEDD  LG+G+   L   GY  +WV           S   DL +LD  L   D L+
Sbjct: 2   RLLLIEDDVALGEGIHQALSREGYTVDWVQDGSSALHSLLSETFDLAVLDLGLPRMDGLQ 61

Query: 68  HLPHWLMLKA-LPVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQLRPLGS 126
            L       + LPV++LTA+   E RI GL AGA DY++KPF   EL AR+ A LR    
Sbjct: 62  VLRRLRDSGSNLPVLILTARDATEDRIAGLDAGADDYLVKPFDLAELKARLRALLRRSAG 121

Query: 127 ---SVLSYADIVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDELLNLIWGY 183
              +++ +A I ++   + V +   PV L PKE+QLL  LL  PGRV  RD L+ L++G+
Sbjct: 122 RAQALIEHAGISLNPGTQQVSYQGKPVALTPKEYQLLHELLSPPGRVMTRDHLMQLLYGW 181

Query: 184 QYFPTTRTVDNHILHLRQKLPQLDIETLRGVGY 216
                + T++ HI HLR+K     I T+RGVGY
Sbjct: 182 SEEAESNTLEVHIHHLRKKFSTDLIRTIRGVGY 214