Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  116 bits (290), Expect = 4e-31
 Identities = 76/214 (35%), Positives = 116/214 (54%), Gaps = 6/214 (2%)

Query: 11  ILLIEDDTLLGQGLRDYLHDHGYACEWVTQSQQVEKHWFST--DLVILDRQLHDGDSLKH 68
           +LL EDD L+  G+   L+  G   +  T +   E    +   D++ILD  L D D +  
Sbjct: 3   VLLAEDDALIASGIVAGLNAQGLTVDHATTAANAEAMLRAANFDVLILDLGLPDEDGISL 62

Query: 69  LPHWLML-KALPVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQLRPLGS- 126
           L        ALPV+VLTA+  V  R+ GL+AGA DY+LKPF  +EL AR+   +R +   
Sbjct: 63  LRRLRQQGMALPVLVLTARDAVSDRVTGLQAGADDYLLKPFDLRELAARLHTLMRRMAGR 122

Query: 127 --SVLSYADIVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDELLNLIWGYQ 184
             +++ +  +  D     V  +  PV+L  +E  LL  LL N GRV   ++L + ++G+ 
Sbjct: 123 SVNIIEHGRLSYDPDRCEVRLDGQPVDLSRREQALLQALLNNQGRVLSSEQLKDAVYGFA 182

Query: 185 YFPTTRTVDNHILHLRQKLPQLDIETLRGVGYRL 218
               +  ++ HI HLR+KL    +ET+RG+GYRL
Sbjct: 183 DDVESNALNVHIHHLRRKLGNGIVETVRGLGYRL 216