Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., Two component Transcriptional regulator, Winged helix family (NCBI) from Rhodospirillum rubrum S1H

 Score =  119 bits (299), Expect = 4e-32
 Identities = 79/222 (35%), Positives = 123/222 (55%), Gaps = 12/222 (5%)

Query: 10  RILLIEDDTLLGQGLRDYLHDHGYACEWVTQSQQ--VEKHWFSTDLVILDRQLHDGDSLK 67
           RIL+IEDD  +   L   L + G+  + V   +    +    + DL+I+DR L + D L 
Sbjct: 2   RILVIEDDKEVAAHLLKGLREAGHVADSVADGRDGLFQAAGEAYDLLIVDRMLPNVDGLT 61

Query: 68  HLPHWLML-KALPVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQLRPLGS 126
            +       K +PV++L+A  EV+ R++GL+AG  DY++KPF+  ELLARI+A  R    
Sbjct: 62  IVRTLRASGKTVPVLILSALGEVDDRVKGLRAGGDDYLVKPFAFAELLARIDALTRRTAG 121

Query: 127 S-----VLSYADIVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDELLNLIW 181
           S      L   ++ +D+  R V      ++L+P+EF+LL  L+++  +V  R  LL  +W
Sbjct: 122 SDAEQTRLRAGEVEMDLLARRVTRGSRTIDLQPREFRLLEYLMRHADQVVTRTMLLENVW 181

Query: 182 GYQYFPTTRTVDNHILHLRQKL----PQLDIETLRGVGYRLK 219
            Y + P T  VD HI  LR+K+     Q  +ET+RG GY L+
Sbjct: 182 DYHFDPQTNVVDVHISRLRRKMDEGFAQPFLETVRGAGYVLR 223