Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., Two component Transcriptional regulator, Winged helix family (NCBI) from Rhodospirillum rubrum S1H

 Score =  124 bits (310), Expect = 2e-33
 Identities = 86/224 (38%), Positives = 118/224 (52%), Gaps = 19/224 (8%)

Query: 11  ILLIEDDTLLGQGLRDYLHDHGYACEWVTQSQQVEKHWF-----STDLVILDRQLHDGDS 65
           +L++ED+  L   LR  L   GY    V+++   E+          D+VILD  L     
Sbjct: 5   VLIVEDEVSLVTLLRYNLEKEGYR---VSEAMDGEEAMTLVAEDQPDVVILDWMLPSLSG 61

Query: 66  L---KHLPHWLMLKALPVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQLR 122
           +   + L      + LP+++LTA+ E   RI GL  GA DY+ KPFS  ELLAR++A LR
Sbjct: 62  IEVCRQLRRKPRTRDLPILMLTARGEESDRIRGLNTGADDYMSKPFSMPELLARVKALLR 121

Query: 123 PL----GSSVLSYADIVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDELLN 178
                     LSY+D+V+D+    V      + L P EF+LL  L+QNPG V+ R+ELLN
Sbjct: 122 RAQPTSAKGTLSYSDVVMDLGAHRVTRGGRYIHLGPTEFRLLQFLMQNPGAVFSREELLN 181

Query: 179 LIWGYQYFPTTRTVDNHILHLRQKL---PQLD-IETLRGVGYRL 218
            +WG   +   RTVD HI  LR+ L      D I T+R  GY L
Sbjct: 182 AVWGPDIYVEPRTVDVHIRRLRKALNGEASTDLIRTVRAAGYAL 225