Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., phosphate regulon response regulator PhoB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  119 bits (299), Expect = 4e-32
 Identities = 76/227 (33%), Positives = 123/227 (54%), Gaps = 15/227 (6%)

Query: 10  RILLIEDDTLLGQGLRDYLHDHGY---ACEWVTQSQQVEKHWFSTDLVILDRQLHDGDSL 66
           RIL++ED+  + + L   +  HG+   A E    +  + K  +  DL++LD     G  +
Sbjct: 14  RILIVEDELAIREMLTFVMEQHGFTTSAAEDFDSAIALLKEPYP-DLILLDWMFPGGSGI 72

Query: 67  ---KHLPHWLMLKALPVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQLRP 123
              K L      + +P+I+LTA+ E E +++GL+ GA DY+ KPFS +EL+ARI+A LR 
Sbjct: 73  QLAKRLKQDEFTRQIPIIMLTARGEEEDKVKGLEVGADDYITKPFSPKELVARIKAVLRR 132

Query: 124 LG----SSVLSYADIVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDELLNL 179
                    +    +++D  +  V    T +++ P EF+LL   + +P RVY R++LL+ 
Sbjct: 133 SAPTRLEETIDVQGLLLDPVSHRVSVGDTVLDMGPTEFRLLHFFMTHPERVYSREQLLDN 192

Query: 180 IWGYQYFPTTRTVDNHILHLRQKLPQLD----IETLRGVGYRLKGAS 222
           +WG   +   RTVD HI  LR+ + +      I+T+RG GYR    S
Sbjct: 193 VWGTNVYVEDRTVDVHIRRLRKAVEESGHDRLIQTVRGAGYRFSTRS 239