Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., two component transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  119 bits (298), Expect = 5e-32
 Identities = 75/222 (33%), Positives = 122/222 (54%), Gaps = 15/222 (6%)

Query: 10  RILLIEDDTLLGQGLRDYLHDHGY---ACEWVTQSQQVEKHWFSTDLVILDRQLHDGDSL 66
           RIL++ED+  + + L   +  HG+   A E    +  + K  +  DL++LD     G  +
Sbjct: 4   RILIVEDELAIREMLTFVMEQHGFTTSAAEDFDSAIALLKEPYP-DLILLDWMFPGGSGI 62

Query: 67  ---KHLPHWLMLKALPVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQLRP 123
              K L      + +P+I+LTA+ E E +++GL+ GA DY+ KPFS +EL+ARI+A LR 
Sbjct: 63  QLAKRLKQDEFTRQIPIIMLTARGEEEDKVKGLEVGADDYITKPFSPKELVARIKAVLRR 122

Query: 124 LG----SSVLSYADIVVDVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDELLNL 179
                    +    +++D  +  V    T +++ P EF+LL   + +P RVY R++LL+ 
Sbjct: 123 SAPTRLEETIDVQGLLLDPVSHRVSVGDTVLDMGPTEFRLLHFFMTHPERVYSREQLLDN 182

Query: 180 IWGYQYFPTTRTVDNHILHLRQKLPQLD----IETLRGVGYR 217
           +WG   +   RTVD HI  LR+ + +      I+T+RG GYR
Sbjct: 183 VWGTNVYVEDRTVDVHIRRLRKAVEESGHDRLIQTVRGAGYR 224