Pairwise Alignments

Query, 223 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., two component transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  120 bits (302), Expect = 2e-32
 Identities = 85/226 (37%), Positives = 127/226 (56%), Gaps = 21/226 (9%)

Query: 10  RILLIEDD-TLLGQGLRDYLHDHGYACEWVTQSQQ--VEKHWFSTDLVILDRQLHDGDSL 66
           +ILL+EDD T +   ++ +L + G+  E  +   Q  ++      DL+ILDR L   D L
Sbjct: 2   KILLVEDDATTIDYIVKGFL-EQGHNIETASDGHQGLLQATSGQYDLLILDRMLPQLDGL 60

Query: 67  KHLPHWLMLKAL----PVIVLTAKIEVEQRIEGLKAGAKDYVLKPFSHQELLARIEAQLR 122
           K L     L+A     PV++L+A   V++R++GL+AG  DY+ KPF+  ELL R E +L 
Sbjct: 61  KLLA---ALRATGNQTPVLILSALAHVDERVKGLRAGGDDYMTKPFAFSELLVRAE-KLM 116

Query: 123 PLGSSVLSYADIVV-----DVANRSVLHNQTPVELKPKEFQLLLMLLQNPGRVYHRDELL 177
             G SV    D+VV     ++  R+V  +   + L+PKEFQLL  L+++  +V  R  L 
Sbjct: 117 QRGQSVPITTDLVVGGLKMELLTRNVTLDGHDLMLQPKEFQLLKYLMEHANQVISRTLLF 176

Query: 178 NLIWGYQYFPTTRTVDNHILHLRQKLPQLD----IETLRGVGYRLK 219
             +W Y + P T  +D HI  LR+K  +L     IET+RG GYRL+
Sbjct: 177 EAVWDYHFDPRTNVIDVHIAKLRRKFEELGHGELIETVRGAGYRLR 222