Pairwise Alignments

Query, 224 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., two component transcriptional regulator, winged helix family from Synechococcus elongatus PCC 7942

 Score =  191 bits (485), Expect = 1e-53
 Identities = 98/221 (44%), Positives = 145/221 (65%), Gaps = 1/221 (0%)

Query: 3   ILLIEDDERIARFIERGLKAEGHQIHRLKDGQYGLETVKSSEPDLLILDRMLPHVDGLTL 62
           ILLIEDD ++  F+E+ L  EG+Q+    +G  GL   +S +PDLLILD MLP + G+ +
Sbjct: 5   ILLIEDDPKLLLFVEQELSLEGYQVTVANNGLDGLSLARSIQPDLLILDWMLPTLSGVDI 64

Query: 63  CQQIRATGNQVLILMLSALGEVEERIQGLRTGADDYLAKPFHFEELLARIEALQRRNIQT 122
           C ++R+TG Q  I++L+A  E+ +R+ GL +GADDY+ KPF  EELLAR++A Q R +  
Sbjct: 65  CLRLRSTGVQTPIILLTAKDEISDRVSGLNSGADDYVTKPFSIEELLARVKA-QLRRVNP 123

Query: 123 HTSNKLRFADLELCLSTMRVYRAEQPIELTAKEISILELFLRKPGHIFSRERILANVWGI 182
              ++L+FAD+ L   T  VYR  Q +ELTAKE  +LE  LR    + +R++IL  VWG 
Sbjct: 124 EEPDRLQFADVSLHRLTHEVYRGSQRLELTAKEFDLLEFLLRHARQVVTRDQILEQVWGY 183

Query: 183 HQDPLTNVVDVYMRRLRKKIDMPFAQPLIQTKRGMGYYLGD 223
                +N+++VY+R LR K++    Q ++QT RG+GY + D
Sbjct: 184 DFMGESNIIEVYIRALRLKLEASNPQRILQTVRGVGYVIRD 224