Pairwise Alignments

Query, 224 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., Two component Transcriptional regulator, Winged helix family (NCBI) from Rhodospirillum rubrum S1H

 Score =  207 bits (528), Expect = 1e-58
 Identities = 108/222 (48%), Positives = 148/222 (66%), Gaps = 1/222 (0%)

Query: 1   MRILLIEDDERIARFIERGLKAEGHQIHRLKDGQYGLETVKSSEPDLLILDRMLPHVDGL 60
           MRIL+IEDD+ +A  + +GL+  GH    + DG+ GL        DLLI+DRMLP+VDGL
Sbjct: 1   MRILVIEDDKEVAAHLLKGLREAGHVADSVADGRDGLFQAAGEAYDLLIVDRMLPNVDGL 60

Query: 61  TLCQQIRATGNQVLILMLSALGEVEERIQGLRTGADDYLAKPFHFEELLARIEALQRRNI 120
           T+ + +RA+G  V +L+LSALGEV++R++GLR G DDYL KPF F ELLARI+AL RR  
Sbjct: 61  TIVRTLRASGKTVPVLILSALGEVDDRVKGLRAGGDDYLVKPFAFAELLARIDALTRRTA 120

Query: 121 QTHT-SNKLRFADLELCLSTMRVYRAEQPIELTAKEISILELFLRKPGHIFSRERILANV 179
            +     +LR  ++E+ L   RV R  + I+L  +E  +LE  +R    + +R  +L NV
Sbjct: 121 GSDAEQTRLRAGEVEMDLLARRVTRGSRTIDLQPREFRLLEYLMRHADQVVTRTMLLENV 180

Query: 180 WGIHQDPLTNVVDVYMRRLRKKIDMPFAQPLIQTKRGMGYYL 221
           W  H DP TNVVDV++ RLR+K+D  FAQP ++T RG GY L
Sbjct: 181 WDYHFDPQTNVVDVHISRLRRKMDEGFAQPFLETVRGAGYVL 222