Pairwise Alignments

Query, 549 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 977 a.a., periplasmic sensor hybrid histidine kinase from Synechococcus elongatus PCC 7942

 Score =  122 bits (306), Expect = 6e-32
 Identities = 96/335 (28%), Positives = 158/335 (47%), Gaps = 13/335 (3%)

Query: 210 LAVFGMVSGALLGVWLLRTLSKPLAELVKSTTALEQGRLDHRISISGPDELKTLARHFNY 269
           L V   V GA+        L   + +L  +  A+  G+L  +I  SG DEL  LA+ FN 
Sbjct: 375 LGVIIAVLGAIAARGWAAHLGMRIEQLAHAADAMASGQLQQQIPTSGRDELTVLAQAFNR 434

Query: 270 MAQSLEQ---AQQKERMSRQLIEREVADRTQELAQALQTLEKAKHQQKEFFANVSHELRS 326
           MA +L +   + +     R    RE  DR   L QA +  E A   +  F AN+SHELR+
Sbjct: 435 MAVTLRELLVSLEHRVQERTAALRETNDR---LEQAREQAEAANQAKSAFLANMSHELRT 491

Query: 327 PATAILGEAQITLRSRHNSDD--EYRQTLLRISESAEQLAFRIEDLLMLIRHDERLFHPA 384
           P  AI+G +++ +    +  +  E      +I+ + + L   I  +L L + +       
Sbjct: 492 PLNAIIGYSEMMMEEAEDGIEVEELLPDFRKINNAGKHLLELINSILDLSKIEAGRMELY 551

Query: 385 LTELLLGEIWQAVVRQASLLTHAQQVELTVNTPAQGEWQTQLCYTDCDKLLMVIRILVDN 444
           L    L E+   V      L    Q +L V+ PA       L   D  KL   +  L+ N
Sbjct: 552 LESFSLPELINGVKSIIKPLIEKNQNQLLVDCPAD----IGLMTADVTKLRQTLLNLLSN 607

Query: 445 ALRYDPTQQPIGLNLELDEEAWRVQLVDQGIGIAEADLSVIFERYFRAENGKRYRPDGLG 504
           A ++   Q  I L +    +    ++VD GIG++   +  IFE + +A++    +  G G
Sbjct: 608 ASKFTH-QGTIQLQVAAQGDQVVFKVVDSGIGMSPEQIDRIFEAFAQADDSTTRKFGGTG 666

Query: 505 IGLTLAQSIVKQLDGEIRIESVLEQGTTVTLTFPR 539
           +GL++++  ++ + G+I +ESVL +G+T T+T PR
Sbjct: 667 LGLSISRHFIEMMGGKITVESVLGEGSTFTITLPR 701