Pairwise Alignments

Query, 549 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 436 a.a., periplasmic sensor signal transduction histidine kinase from Synechococcus elongatus PCC 7942

 Score =  110 bits (276), Expect = 8e-29
 Identities = 76/239 (31%), Positives = 122/239 (51%), Gaps = 4/239 (1%)

Query: 302 ALQTLEKAKHQQKEFFANVSHELRSPATAILGEAQITLRSRHNSDDEYRQTLLRISESAE 361
           A++ + ++  Q K+F A+ SHELR+P   I    Q  L        E +Q L  I     
Sbjct: 190 AMRPVYESYGQLKQFTADASHELRNPIATIQANVQAALTEPQGLAPEQQQVLQVIERLTR 249

Query: 362 QLAFRIEDLLMLIRHDERLFHPA-LTELLLGEIWQAVVRQASLLTHAQQVELTVNTPAQG 420
           +L   ++DLL L R D  L  PA +  L L  +   VV + SL    Q + L +  P   
Sbjct: 250 RLGSLVDDLLFLARQDSGLQQPAPIQNLDLDALLLDVVEEQSLYAQEQNLSLDLQLP-DA 308

Query: 421 EWQTQLCYTDCDKLLMVIRILVDNALRYDPTQQPIGLNLELDEEAWRVQLVDQGIGIAEA 480
           +   QL     ++L  +   L+ NAL+Y P    + + ++   +  +V++ D GIGI+  
Sbjct: 309 DQALQLTGVR-EQLARLFTNLIANALQYTPASGQVTVQVQPLNQGLQVEVRDSGIGISPE 367

Query: 481 DLSVIFERYFRAENGKRYRP-DGLGIGLTLAQSIVKQLDGEIRIESVLEQGTTVTLTFP 538
            L  +FER++RA+  +R R   G G+GL +AQ+IV++  G+I + S + QGTT  +  P
Sbjct: 368 TLPHVFERFYRADPARRPRDRGGSGLGLAIAQAIVERHHGKIHLRSQVGQGTTAVVWLP 426