Pairwise Alignments

Query, 549 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 614 a.a., ATP-binding protein from Methanococcus maripaludis JJ

 Score =  109 bits (272), Expect = 4e-28
 Identities = 81/343 (23%), Positives = 163/343 (47%), Gaps = 24/343 (6%)

Query: 200 LSNVRSVITSLAVFGMVSGALLGVWLLRTLSKPLAELVKSTTALEQGRLDHRISISGPDE 259
           L++V   I  +A   ++    + V L + +   + +L  S  +  +G  D R SI   DE
Sbjct: 289 LNSVIQKIFFIAFSSLIIAVFVAVILNKKIVDSIKKLKNSAESFGRGNYDERASIDTGDE 348

Query: 260 LKTLARHFNYMAQSLEQAQQKERMSRQLIEREVADRTQELAQALQTLEKAKHQQKEFFAN 319
           L+ LA  FN MA  + ++ +K +                L  +   L++  + + E  + 
Sbjct: 349 LEELAESFNKMADEIRKSDKKLKSD-----------AHTLKTSFDELKEVDNLKSEILSI 397

Query: 320 VSHELRSPATAILGEAQITL-RSRHNSDDEYRQTLLRISESAEQLAFRIEDLLMLIRHDE 378
           VSHELR+P TAILG  ++    +     ++ ++ +  ISE++++L    +++  L+  D 
Sbjct: 398 VSHELRTPLTAILGYVELLKDETAGKLSEKQKEFISVISENSDRLKRITDNMSDLVTVDN 457

Query: 379 RLFHPALTELLLGEIWQAVVRQASLLTHAQQVELTV---NTPAQGEWQTQLCYTDCDKLL 435
           ++      ++ L +    ++R       ++ + L     N   +G         D  K+ 
Sbjct: 458 KILDIKRDKINLKKEVNDILRSFDYFAESKNIVLLEDVDNLDIKG---------DKSKIH 508

Query: 436 MVIRILVDNALRYDPTQQPIGLNLELDEEAWRVQLVDQGIGIAEADLSVIFERYFRAENG 495
            V+  L++NA+++   Q  + +    D+    +++ DQG GI +  L  IF+++++ ++ 
Sbjct: 509 QVLSNLIENAIKFSKKQTKVTVMGFEDKGNIHLEITDQGPGIPKEHLGKIFDKFYQIDSS 568

Query: 496 KRYRPDGLGIGLTLAQSIVKQLDGEIRIESVLEQGTTVTLTFP 538
            +    G G+GL + + IV+   G I +ES + +GTTV + FP
Sbjct: 569 SKREVGGSGLGLAVCKKIVESHGGSIWVESKIGKGTTVHVMFP 611