Pairwise Alignments

Query, 549 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis JJ

 Score =  121 bits (303), Expect = 9e-32
 Identities = 84/347 (24%), Positives = 169/347 (48%), Gaps = 18/347 (5%)

Query: 193 EEAALDALSNVRSVITSLAVFGMVSGALLGVWLLRTLSKPLAELVKSTTALEQGRLDHRI 252
           E   L   +NVR+    + + G++   ++   + R + KPL +L +    +  GR D ++
Sbjct: 304 ESKFLALQANVRNQTFVVGLIGLLIALIVSYLINRGIIKPLEQLKQGAEWVSNGRYDQKV 363

Query: 253 SISGPDELKTLARHFNYMAQSLEQAQQKERMSRQLIEREVADRTQELAQALQTLEKAKHQ 312
            +   DE   LA+ FN MA  +  + +K           +    +EL  +   L++    
Sbjct: 364 IVDSDDEFGELAKAFNKMATQINISDEK-----------LKKHAEELKTSYNELKELDKL 412

Query: 313 QKEFFANVSHELRSPATAILGEAQITLRSRHNSDDEYRQTLLRISE-SAEQLAFRIEDLL 371
           + E  A VSHELR+P T+I G  ++ L     + ++ ++  L++++ +  +L   IE +L
Sbjct: 413 KSELIAIVSHELRTPLTSIKGYVELVLDGTMGTINDSQKKCLQVADDNIVRLRRLIESML 472

Query: 372 MLIRHDERLFHPALTELLLGEIWQAVVRQASLLTHAQQVELTVNTPAQGEWQTQLCYTDC 431
            L + +         ++ L  I   V+     L   + ++L        E +      D 
Sbjct: 473 DLSKIERGELEMYREKVNLRAIVCDVIEYLKPLATEKNIKLNK------EVEDIAIEADK 526

Query: 432 DKLLMVIRILVDNALRYDPTQQPIGLNLELDEEAWRVQLVDQGIGIAEADLSVIFERYFR 491
           D++  V+  L++NA+++ P  + I ++  L++E   +++ D+G GI + D+  IF R+++
Sbjct: 527 DRITQVLTNLIENAIKFSPANESILVSGVLEDEHIHLKVTDRGAGIPKKDMEKIFNRFYQ 586

Query: 492 AENGKRYRPDGLGIGLTLAQSIVKQLDGEIRIESVLEQGTTVTLTFP 538
            ++  + +  G G+GL + +SIV+   G I +ES L +G+T  +  P
Sbjct: 587 VDSSTKRKKGGSGLGLAVCKSIVEAHKGSIWVESELGKGSTFHIILP 633