Pairwise Alignments

Query, 549 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  107 bits (268), Expect = 9e-28
 Identities = 133/537 (24%), Positives = 225/537 (41%), Gaps = 35/537 (6%)

Query: 16  RYRLAFVLALLLTLILAQVGVAYWS-NQVANQHLLRGQISSQILQGFMQLSTEKQQLKVW 74
           + RL+   ALL    +    + Y+  N+VA++ L     S + +  +   ST+     V 
Sbjct: 13  KLRLSLGAALLAAATVLTSSILYFGLNEVADR-LDTALASERRMARYATASTQAATFLVI 71

Query: 75  LAEYLLIKDGSTLKRDMRFSKIEALLHKLNLLTEQAQQ-----HSLTVQDFSEINQQIKV 129
            +E +     + ++R+     +  L     LL    ++      +L +   S    Q   
Sbjct: 72  ASEAVQAGLPTEVRRERILQVVGQLQETFTLLHADVEEAVFSARALGIDGQSRYGTQSLG 131

Query: 130 ISLFETNFASLKKALRSWEIAKITDDDERWLLLSQSFDRVDDTDLRQLLTQAISLQQQRT 189
           I+  E   A+L + +R   +   T D ER      SF     T    LL QAI+ ++   
Sbjct: 132 IARME---ATLDQTVRG--LLTDTQDTERLRGYIDSFA----TSFDPLLGQAINTERLFR 182

Query: 190 SRYEEAALDALSNVRSVITSLAVFGMVSGALLGVWLLRTLSKPLAELVKSTTALEQGRLD 249
           S            +  +   +A+   +S A     L+R     L  +  +   + +G   
Sbjct: 183 SEILSGIEALRIQLAWMALGIALAAGLSVAAFYFGLVRPQFYRLDAVRSAADQIGRGDFS 242

Query: 250 HRISISGPDELKTLARHFNYMAQSLEQAQQKERMSRQLIEREVADRTQELAQALQTLEKA 309
             + +S  DE+  L++  N MA +L   Q K       +   +A RT+EL QA   LEK 
Sbjct: 243 GVLPVSRLDEIGQLSQQTNRMAAALSDRQAKVDAEWTQLNEIIATRTKELKQANARLEKT 302

Query: 310 KHQQKEFFANVSHELRSPATAILGEAQITLRSRHNSDDEYRQTLLRISESAEQLAFRIED 369
              ++ FFA+VSHELR+P T IL EAQI  +S   + D +      I   AE+L  +I+D
Sbjct: 303 DEDRRRFFADVSHELRTPLTVILMEAQIGRQSIPAAADAF----ATIEARAERLNRKIDD 358

Query: 370 LLMLIRHDERLFHPALTELLLGEIWQAVVRQASLLTHAQQVELTVNTPAQGEWQTQLCYT 429
           LL L R +      A   + L  +  + + +           +T++     E Q +    
Sbjct: 359 LLRLARSETGQLALACVPVALDALVASAIEEVQ--AELDNAGMTLDLVPFRETQVR---A 413

Query: 430 DCDKLLMVIRILVDNALRYDPTQQPIGLNLELDEEAWRVQLVDQGIGIAEADLSVIFERY 489
           D D L  V+  LV NA+R+  + + + +   +      V + D G GI  +    +FER+
Sbjct: 414 DPDWLRQVLVSLVRNAIRHARSGEKLRIAPVVQRTQAGVSITDNGPGIPASRQYQVFERF 473

Query: 490 FRAENGKRYRPDGLGIGLTLAQSIVKQLDGEIRIESVLEQ--------GTTVTLTFP 538
             ++        G GIGL LA+ ++    GEI ++S L +        G  +T+  P
Sbjct: 474 --SQGAGATSAQGFGIGLALARWVIDAHGGEISLQSPLPRSDALGEHPGLRITILLP 528