Pairwise Alignments

Query, 549 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1329 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 97.1 bits (240), Expect = 4e-24
 Identities = 64/251 (25%), Positives = 125/251 (49%), Gaps = 11/251 (4%)

Query: 303  LQTLEKAKHQQKEFFANVSHELRSPATAILGEAQITLRSRHNSD--DEYRQTLLRISESA 360
            L+  +K   ++  FF N +H++R+P T I    +  +     ++   +   T LR   + 
Sbjct: 791  LKKQKKISDEKTHFFINTAHDIRTPLTLIKAPLEEFVEEETLTEIGSQRINTALRNVNAL 850

Query: 361  EQLAFRIEDLLMLIRHDERLFHPALTELLLGEIWQAVVRQASLLTHAQQVELTVNTPAQG 420
             +L+    +L+   R D       ++E  L      +        + + ++ T  +    
Sbjct: 851  LRLS---TNLINFERADVYSSELRISEYELNTYMNEICNSFRSYANIKHIDFTYKS---- 903

Query: 421  EWQTQLCYTDCDKLLMVIRILVDNALRYDPTQQPIGLNLELDEEAWRVQLVDQGIGIAEA 480
            ++     + D DK+  +++ L+ NAL+Y P    + +++   +++W++++ D GIGI   
Sbjct: 904  DFNYLNVWFDKDKMDSILKNLISNALKYTPENGIVSVSISETKDSWKLEVKDTGIGIPAN 963

Query: 481  DLSVIFERYFRAENGKRYRPDGLGIGLTLAQSIVKQLDGEIRIESVLEQGTTVTLTFPRG 540
            + + + + +FR  NG   +  G GIGL L   +V    G+I IESV +QGTT+T+ FP+G
Sbjct: 964  EQNKLLKMHFRGTNGINAKITGSGIGLKLVDKLVHLHSGKINIESVEQQGTTITVVFPKG 1023

Query: 541  EE--QDANLID 549
             +  + +NLID
Sbjct: 1024 NKHFRHSNLID 1034