Pairwise Alignments

Query, 659 a.a., TonB-dependent siderophore receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 697 a.a., heme transport protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  151 bits (381), Expect = 1e-40
 Identities = 180/719 (25%), Positives = 293/719 (40%), Gaps = 104/719 (14%)

Query: 7   SALWLAITAAMSANAVAEQKATP------EQENVVIWGT----KVSSSSESLTT---DDL 53
           +AL  A+ A       A QK+        E + V++  T    KVS +S S+     + L
Sbjct: 17  TALSFALAAEEGVKPTAVQKSAEQGVVETEFDEVLVSATRLSEKVSETSRSVAVVAEEQL 76

Query: 54  SLKQADHMSDLLRDIPGVDV-GGTHSVNQRINIRGLGETNLDIRLDGASQHANMFHHIGN 112
           ++ QA  ++++L++   +++  G  + +Q + IRGL    +   +DGA Q+ +  H  G+
Sbjct: 77  NVSQASSVAEVLKNEANINLTNGPRATSQGVEIRGLSGDRVLQTIDGARQNTSSGHR-GS 135

Query: 113 LTLNPDILKSADVQVGN-NSVTQSG-LGGSVYFETKNAKDLLVGGEQFGARIFGGYASN- 169
             ++P++LKS +V  G  +S+  SG LGG V   TK+A+D L   E FG  +  GY +N 
Sbjct: 136 YFMDPELLKSIEVIRGPASSLWGSGALGGVVAQNTKSAQDFLAPNETFGGYLKQGYDTNG 195

Query: 170 DNQQGSLTVYGQLSETVDAMVYGQGISRDNFEDGAGKETFGVKGDTYNVLAKVGFEPAVG 229
           D  + S  VYGQ + TVD ++ G     +N   G  +          + LAK G++    
Sbjct: 196 DRTKTSGAVYGQQA-TVDWLLNGSYFDSNNINTGNDETLVNSASSGSSGLAKFGWQADEA 254

Query: 230 HRFQVSYDVYRDQGDYSPRPDMAGSANLGLSKNRLVPTHYDRDTITGSYELKQ------D 283
            R  +S  V +        P  A S+++ L + +      D   IT +Y L        D
Sbjct: 255 SRLALSARVNKINELVPSNPSAAVSSSVPLVRRKT-----DDQNITLNYSLAPANNPYLD 309

Query: 284 KHRGKVTLYSSQTEIDRDESVMAGVWPGNRLSRNTATNRNVGINALFQSDYELAAHRNQV 343
            H   + +Y + T+ D D      +        ++   R VGIN    S         ++
Sbjct: 310 TH---LQVYWNSTDYDEDRVTKGQL--------DSTEYRTVGINLNNSSQLG----NTKL 354

Query: 344 SYGMDYVDQT------SKATYGSTPF-MEESAVSTAVFAENKLYVNDVWSLTAGLRFDDF 396
           +YG+D    T       K   G  P  ++        F    + +    +L A LR+D F
Sbjct: 355 TYGVDGYRDTLKTVRDDKGQVGQRPEDIDGETTVWGAFTRADVQLTQTVNLDAALRYDSF 414

Query: 397 KRKA--MTGTKDFDEVTWSLGTEWDVTSDWTLFANARSLFKGPELLETFVRYQDQA---- 450
           K ++  +  + D  E++ SLG  W      TL A     F+ P + E F           
Sbjct: 415 KNQSHNLNASADDTELSPSLGLSWQTQPWLTLSARYDQAFRAPTVEEMFSSGTHYCIPPI 474

Query: 451 ------------RLADNIKPETGLNTQ--GGVRFDKTYGDHFVGANFTLFKTQIDDHI-- 494
                           N+K E   N +     RF++  GD  +     +F+  +DD I  
Sbjct: 475 PGFLPKGLCNTFATNPNLKSEVARNKELKADFRFNELAGDDELAITLNIFRNDVDDFIVQ 534

Query: 495 RTSNSYL----------ISNVGDMEIKGFELSTTYAYQAASAKLSYAHSDANDVTNGGPM 544
           + SN Y            +NV D ++ GFELS  Y        ++Y  +   D   G  +
Sbjct: 535 QVSNPYRGIPGLEQTTSWNNVEDAQLTGFELSGRYRIGQTRLAMNYGQTRGEDRNTGDYI 594

Query: 545 LNSVGNSADMGDSIALSLGYQADSIDTLFGWTSIVVLDEDNVVAG--AAKKEGYDVHNLY 602
                N  ++  S  +  G      D   G     V  + N   G   AK + Y + ++Y
Sbjct: 595 EGMPANKFNVDLSQGIMEG------DMKLGTRVTYVASQTNTPTGYSVAKYDEYTLWDVY 648

Query: 603 AQWTPYS--VPNLVLTFGVDNVFDELYVSHASRVGLAKSFVADDYEPGRSYKLSAAYQF 659
             W P    +  L + F ++N+ DE Y      +          Y+PGR+ KLSA Y F
Sbjct: 649 LAWEPAMGVMSGLRVDFAIENIGDEKYQQAWQTL----------YQPGRNMKLSARYMF 697