Pairwise Alignments

Query, 659 a.a., TonB-dependent siderophore receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 737 a.a., TonB-dependent heme receptor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 85.1 bits (209), Expect = 1e-20
 Identities = 93/374 (24%), Positives = 158/374 (42%), Gaps = 69/374 (18%)

Query: 57  QADHMSDLLRDIPGVDV-GGTHSVNQRINIRGLGET-NLDIRLDGASQHANMFHHIGNLT 114
           QA   ++++ D+ G  + GGT S  +RIN+ G GET + ++ +D A      + + G+  
Sbjct: 74  QATTFAEVIDDMAGAHIDGGTRSGGERINVWGFGETEDFNVYVDNAPVGFEQYRY-GSFF 132

Query: 115 LNPDILKSADVQVGNNSVTQS--GLGGSVYFETKNAKDLLVGGEQFGARIFGGYAS-NDN 171
           L+PD++K  +V  G + V     G GG++Y  TK+A D L   +  GAR+   YAS ND 
Sbjct: 133 LDPDLIKRVEVIKGAHDVRSGNGGFGGAMYVVTKSADDFLKYDQSVGARVKASYASNNDA 192

Query: 172 QQGSLTVYGQLSETVDAMVYGQGISRDNFEDG--AGKETFGVKG-DTYNVLAKVGFEPAV 228
           Q  + TVYG+ ++ +  +++    +R + +D   A  E F   G +  N L KV +E   
Sbjct: 193 QSYTGTVYGRANQQLSGLLH---FTRRDAQDVTLANGEAFEYSGYEQNNYLGKVDYEQG- 248

Query: 229 GHRFQVSYDVYRDQG------DYSPRPDMA-------GSANLGLSKNRLVPTHYDRDTIT 275
            H+  +S   Y D+G         P P ++       GS    L       T Y+ +T +
Sbjct: 249 DHQLMLSVTHYLDEGRKPWANRRGPMPAISDFNIRKYGSYEQALYATTAYNT-YEDNTWS 307

Query: 276 GSYELKQDKHRGKVTLYSSQTEIDRDESVMAGVWPGNRLSRNTATNRNVGINALFQSDYE 335
            +Y     ++     L  +Q  +    +    + P     + T +  N G          
Sbjct: 308 ANY-----RYSPSNPLIDTQIVVSHSANARHWIRPPIAWEKMTVSVGNFG---------- 352

Query: 336 LAAHRNQVSYGMDYVDQTSKATYGSTPFMEESAVSTAVFAENKLYVNDVWSLTAGLRFDD 395
              H + + Y  DY+D                         N L V     +TAGL+F  
Sbjct: 353 ---HESWLDYKRDYID------------------------INNLSVVGAHEITAGLQFRS 385

Query: 396 FKRKAMTGTKDFDE 409
             R ++   K +++
Sbjct: 386 LDRTSLVFNKSYEK 399



 Score = 34.7 bits (78), Expect = 2e-05
 Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 27/169 (15%)

Query: 503 SNVGDMEIKGFELSTTYAYQAASAKLSYAHSDANDVTNGGPMLNSVGNSADMGD----SI 558
           +N+   EI G +L + Y YQ   + L+ +        + G + +S+G    + +     I
Sbjct: 584 TNLDGYEIYGADLESQYRYQDFFSDLAVSWLQGE---HRGSLKDSLGEDEYLANIAPLDI 640

Query: 559 ALSLG-YQADSIDTLFGWTSIVVLDEDNVVAG-----AAKKEGYDVHNLYAQWTPY-SVP 611
            L +G Y  DSI     W       +DNV  G      +  E Y + N+Y  + P  S+ 
Sbjct: 641 QLRVGMYITDSISV--AWQGTWYDAQDNVPEGDIFNAESPSENYFLQNIYLAYEPLDSLK 698

Query: 612 NLVLTFGVDNVFDELYVSHASRVGLAKSFVADDYE-PGRSYKLSAAYQF 659
            L +     N+ ++              F++D    PGR  +LS AY+F
Sbjct: 699 GLSIRLMAKNLTNQQVTP----------FLSDGIPAPGRDVRLSLAYEF 737