Pairwise Alignments

Query, 659 a.a., TonB-dependent siderophore receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 668 a.a., TonB-dependent receptor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 53.1 bits (126), Expect = 4e-11
 Identities = 90/357 (25%), Positives = 144/357 (40%), Gaps = 58/357 (16%)

Query: 342 QVSYGMDYV----DQTSKATYG-------STPFMEESAVST-AVFAENKLYVNDVW---- 385
           +++ G+DY+    D  S AT         + PF E+       +FAE++   ++      
Sbjct: 331 ELTLGLDYMSSVHDGRSMATGDVGLDDLLNKPFKEDMRYKNYGLFAESRYGFDNQGVGNS 390

Query: 386 SLTAGLRFDDFKRKAMTGTKDFDEVTWSLGT-----EWDVTSDWTLFANARSLFKGPELL 440
           SL AGLR D +  + +   +   E T   G      + D    +  F +A+ +   P+  
Sbjct: 391 SLHAGLRVDRWDGELLIAQQGEREDTLYSGYVRYEYQLDAHQYYAGFGSAQRM---PDYW 447

Query: 441 ETFVRYQDQ-ARLADNIKPETGLNTQGGVRFDKTYGDHFVGANFTLFKTQIDDHI---RT 496
           E      D  A+ A ++K ET      G  +        V A+ +LF  +I+D+I    T
Sbjct: 448 EIMKASADNPAQKAFDLKAETTNQFDIGWIYQGP-----VEASVSLFYGEINDYILIDST 502

Query: 497 SNSYLISNVGDMEIKGFELSTTYAYQ---AASAKLSYAHSDANDVTNGGPMLNSVGNSAD 553
           SN+ +  N+ D  + G E S  YA     +    LSY H + ND         ++G  + 
Sbjct: 503 SNTTVARNI-DASLFGGEASLDYALNEQWSTQLTLSYTHGE-NDTDKV-----ALGQISP 555

Query: 554 MGDSIALSLGYQADSIDTLFGWTSIV-----VLDEDNVVA-GAAKKEGYDVHNLYAQWTP 607
           +     L++ YQ  +      W  +       L   N+V        G+    L A W+ 
Sbjct: 556 L--EARLTVNYQWQAWTMAAQWRLVASQDRYTLGHGNIVGQDLGPSSGFGTLALNASWS- 612

Query: 608 YSVPNLVLTFGVDNVFDELYVSHASRVGLAKSFVADD-----YEPGRSYKLSAAYQF 659
           YS  +L   FGV+N+FD  Y  H S+ G        +      EPGR+      YQF
Sbjct: 613 YS-KDLSFIFGVENLFDATYAEHVSKAGTGNDLPGSEAMFRVNEPGRNLWAKLTYQF 668