Pairwise Alignments

Query, 358 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 65.5 bits (158), Expect = 2e-15
 Identities = 67/260 (25%), Positives = 125/260 (48%), Gaps = 22/260 (8%)

Query: 108 LVIILLLEGTLRFAYDDLKLELCANQHPQALMVNLEQPCIFH----RRLHQGM-TVRKLN 162
           L + L+L+G+ + A DD +L +C+    Q+++   + P I H     R H  +  V KL+
Sbjct: 52  LSLSLILQGSKQVAIDD-RLRICSAG--QSMLTTFDLPVISHVTEATRYHPFIGLVLKLD 108

Query: 163 IVLSPDTLQKFAQHSCPLQHFLQQDKALVPLSLNEESWQAVESLLNRRV----IHTISAH 218
             L   T  +      P +    Q  A+    ++     A+  LL   +    I ++ A 
Sbjct: 109 YGLIAQTCTELNLER-PSKDLRYQ--AISTQDIDTGLCDAMSRLLGLHLTPEYIESL-AQ 164

Query: 219 IAREATVWRLVHDAVLQCPKHATSLSQHQEGQSEQWINQLLHYIDQHLHEEICLEQLAER 278
           + ++  V RL+H +     +H  S+     G   + I Q++ ++ Q+  + I + +LA++
Sbjct: 165 LYKKEIVIRLLHGSHGMHLRHLASV-----GSPSRQIVQIVAWMKQNFAQAIGINELADK 219

Query: 279 HAMSVSNLQRKFKTRLNMTIAHYIRHRRLQLARQQLERGLVTITEAAYEAGYLHPSNFTA 338
             MS S  ++ FK     +   Y++H RLQ AR Q+    +  ++A+   GY  PS F+ 
Sbjct: 220 AHMSASAFRQHFKALTGSSPLQYLKHLRLQEARDQMLLNGLDASQASGVVGYESPSQFSR 279

Query: 339 AFKKAFGISPQAFVE-LKQA 357
            + + FG+ PQ  ++ L+QA
Sbjct: 280 EYSRLFGLPPQKDIQRLRQA 299