Pairwise Alignments

Query, 358 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 56.6 bits (135), Expect = 8e-13
 Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 21/174 (12%)

Query: 191 VPLSLNEE---------SWQAVESLLNRRVIHTISAHIAREATVWRLVHDAVLQ------ 235
           VP +LNE          + +A+E  ++R ++  + + +  EA    +V + + +      
Sbjct: 115 VPQALNESRLPGYFIAPTGEAIECSIHR-LLQALQSPLEAEALGEAMVLEILYRLLALPN 173

Query: 236 -CPKHATSLSQHQEGQSEQWINQLLHYIDQHLHEEICLEQLAERHAMSVSNLQRKFKTRL 294
             P +A +LS  +  +    I++ L Y+ +H    I ++QLA    MS S   R FK   
Sbjct: 174 AAPLYALALSHTRLSR----IDKALSYLHKHYAASIEVDQLAALVNMSPSAFHRCFKEVT 229

Query: 295 NMTIAHYIRHRRLQLARQQLERGLVTITEAAYEAGYLHPSNFTAAFKKAFGISP 348
             +   Y++  RL  A++ L+R  V + +AA E GY  P+ F+  FK+ F  SP
Sbjct: 230 ASSPIQYLKKVRLNKAKELLQRPGVKVKQAAIEVGYESPAQFSREFKRYFSHSP 283