Pairwise Alignments

Query, 358 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., AraC family transcriptional regulator from Klebsiella michiganensis M5al

 Score = 57.8 bits (138), Expect = 4e-13
 Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 4/196 (2%)

Query: 161 LNIVLSPDTLQKFAQHSCPLQHFLQQDKALVPLSLNEESWQAVESLLNRRVIHTISAHIA 220
           L+  L+ + + +  QH    ++ L   ++++   +++    AV  LL   + + + A I 
Sbjct: 97  LDFHLAAELMLQIEQHDA--RYPLAAPQSMMSSPMDDAVKTAVRHLLEV-LNNPLEAAIL 153

Query: 221 REATVWRLVHDAVLQCPKHATSLSQHQEGQSEQWINQLLHYIDQHLHEEICLEQLAERHA 280
             A V  L    +     +A   +   +GQ  + I ++L  I     E + L QLA    
Sbjct: 154 GPARVRELYFRVLTGAQGNAMRAALTLQGQFGK-IGKVLQRIHATYAEPLTLTQLAMEAG 212

Query: 281 MSVSNLQRKFKTRLNMTIAHYIRHRRLQLARQQLERGLVTITEAAYEAGYLHPSNFTAAF 340
           MSV      FK    M    Y++  RL  AR  + R  +T   A+Y  GY  PS F   F
Sbjct: 213 MSVPTFHSHFKAITRMPPMQYVKSVRLHQARMLMVRQQITAAAASYAVGYESPSQFNREF 272

Query: 341 KKAFGISPQAFVELKQ 356
           K+ FG+ P   ++  Q
Sbjct: 273 KRLFGLPPAEEIKRMQ 288