Pairwise Alignments

Query, 358 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., HTH-type transcriptional activator RhaR from Enterobacter sp. TBS_079

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 72/304 (23%), Positives = 139/304 (45%), Gaps = 23/304 (7%)

Query: 51  RHVVKERDEQIVAQNLNQPVMAQGHFVEYVSPNGFTLHGGSSLELADCDVMTTSAPALVI 110
           R+ +  R  Q+    +N   + QG+  E    +G +L   +   L   +  +  +  L +
Sbjct: 24  RYGIDYRFPQLKDTQVNNRAVLQGNVEEMTLSSGISLTHSNVRVLQPYETTSRHSSPLYM 83

Query: 111 ILLLEGTLRFAYDDLKLELCANQHPQALMVNLEQPCIFHRRLHQGMTVRKLNIVLSPDTL 170
           +++LEG +  A + ++  + +     A    L +  I   R     T++ L+  L P   
Sbjct: 84  LVVLEGGVTIALNGVEYVVRSGM---AFSSRLSEEQIMCARHDADSTLKTLSFGLFPHD- 139

Query: 171 QKFAQHSCPLQHFLQQDKALVPLSLNEESWQAVESLL------NRRVIHTISAHIAREAT 224
              A+    L+  LQ+ ++L   +L    W   E +L       ++ +  +S  +  E  
Sbjct: 140 ---ARRETLLESLLQEWQSLNAPTL---VWHVPEFILAGIQHAQQQGLSALSRQLLLEGL 193

Query: 225 VWRLVHDAVLQCPKHATSLSQHQEGQSEQWINQLLHYIDQHLHEEICLEQLAERHAMSVS 284
           +++L+   + Q  +      +H        + ++   ++Q   ++  L QLA   AMS S
Sbjct: 194 MYQLLGQGLAQRQQSFPCRPEHAR------LERVRSRLEQSPEQDHTLAQLAALAAMSPS 247

Query: 285 NLQRKFKTRLNMTIAHYIRHRRLQLARQQLERGLVTITEAAYEAGYLHPSNFTAAFKKAF 344
           +L+ KF+ R   T+  Y+R  RL LAR+ L  G  ++ +AA+  GY H +NF  AF++ +
Sbjct: 248 SLRSKFRQRYGCTLFDYLRECRLALARRYLLEG-YSVQQAAWMCGYQHATNFATAFRRHY 306

Query: 345 GISP 348
           GI+P
Sbjct: 307 GIAP 310