Pairwise Alignments

Query, 316 a.a., iron(III) ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., ABC-type Fe3+-siderophore transport system, permease component from Pseudomonas stutzeri RCH2

 Score = 75.1 bits (183), Expect = 2e-18
 Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 16/287 (5%)

Query: 38  RVPKVLAMVFAGIAIAQSSLAFQTITHNRILTPSIMGFDALYMFTQVLVVVLFGGMSSIA 97
           R+P+ L    AG  +A   +A Q +  N +  P ++G  +       + +V  G     A
Sbjct: 66  RLPRTLLGCAAGAVLALCGVAMQGLFRNPLADPGLVGVSSGAALGAAVAIV--GATFVPA 123

Query: 98  MNVYWN-FSLSVAAM---LSFSTLLFTFYFRSGHRNLIVLLLLGVILGQLFSSIASFFVM 153
           + + W  + LS  A    L  + L++    R G  ++  +LL G+ L  L  ++   F  
Sbjct: 124 LPLSWEPYLLSAFAFIGGLGVTLLVYRLGRRDGQTHVATMLLSGIALTALAGAVVGLFTY 183

Query: 154 LMDPNDFASVQANMFASFNNVNTKLVYVVSPLLLLACVLLF---RQHRVLDVFWLDKDNA 210
           L D     S+      S N  +   ++   PLLL+   + F   ++ + L+   L +  A
Sbjct: 184 LADDRTLRSLTFWNLGSLNGASYVRLW---PLLLITIAVAFWLPQRAKALNALLLGESEA 240

Query: 211 VSLGVDVHKVTRNVLLISALLISISTALVGPILFFGLLVTNLTREWFRSYRHSTLLLATS 270
             LG +V ++ R +++ +AL +  + A  G I F GL+V +L R          LLL  S
Sbjct: 241 RHLGFNVERIKRELVVCTALGVGAAVAAAGLIGFIGLVVPHLMRLLVGPDHR--LLLPAS 298

Query: 271 AMSVCALLSGQWIIEKVFHFGTTL--SVVINFIGGIYFLSLLLRNKV 315
           A++  +LL    +  ++      L   +V   +G  +FL LLLR +V
Sbjct: 299 ALAGASLLLLADVAARLVIAPAELPIGIVTALLGAPFFLYLLLRERV 345