Pairwise Alignments

Query, 316 a.a., iron(III) ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., transport system permease protein (RefSeq) from Shewanella loihica PV-4

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 17/280 (6%)

Query: 38  RVPKVLAMVFAGIAIAQSSLAFQTITHNRILTPSIMGFDALYMFTQVLVVVLFGGMSSIA 97
           R+P++L    AG  +A +    QT+T N +  P + G  +      V+V+ L GG+    
Sbjct: 72  RLPRILLAFIAGFGLALAGAVLQTVTRNPLADPYLFGISSGASLGAVVVITLLGGVGGAL 131

Query: 98  MNVYWNFSLSVAAMLSFSTLLFTFYFRSGHRNLIVLLLLGVILGQLFSSIASFFVMLMDP 157
            +V       + A L+   +L     R  +  +  +LL GV +  LF ++AS  +    P
Sbjct: 132 ASVGLPLGAFIGASLAVLMVL-ALCGRDLNTQIERMLLSGVAISFLFGALASLMLYFSGP 190

Query: 158 NDFASVQANMFASFNNVNTKLVYVVSPLLLLACVLLFRQHRVLDVFWLDKDNAVSLGVDV 217
              ASV      SF   + +++++   L+L A  +L    R +       + A +LG+ V
Sbjct: 191 QSAASVLFWSLGSFAKASWQMLWLPWLLVLAASAILLLLKRQILAIQAGDETAHTLGIRV 250

Query: 218 HKVTRNVLLISALLISISTALVGPILFFGLLVTNLTREWFRSYRHSTLLLATSAMSVCAL 277
            ++    LL+ +L+ ++  A  G I F GL+V ++ R          LL    A+ + AL
Sbjct: 251 QRLRLVSLLLCSLITAVLVANCGGIGFVGLMVPHMVR---------LLLPGRFALLLTAL 301

Query: 278 LSGQWIIE-------KVFHFGTTLSVVINFIGGIYFLSLL 310
           + G ++I         + +    + ++   IG ++FL +L
Sbjct: 302 VGGLFMIWVDVLARCLLSYQELPVGIITAVIGSLFFLFIL 341