Pairwise Alignments

Query, 316 a.a., iron(III) ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., iron-compound ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 77.0 bits (188), Expect = 7e-19
 Identities = 80/331 (24%), Positives = 139/331 (41%), Gaps = 44/331 (13%)

Query: 17  FAALFIGVGLN---ADNYQYFLSRRVPKVLAMVFAGIAIAQSSLAFQTITHNRILTPSIM 73
           F+ LF+G       A   +  +  R+P++L    AG  ++ +    QT+T N +  P + 
Sbjct: 60  FSQLFMGENAPSTAAMTDRIVMELRLPRILLAFVAGAGLSLAGSVLQTVTRNPLADPYLF 119

Query: 74  GFDALYMFTQVLVVVLFGGM-----------------SSIAMNVYWNFSLSVAAMLSFST 116
           G  +   F  V+++ LF G                  + I   + W FSL   A +  S 
Sbjct: 120 GISSGASFGAVVMLTLFSGSGFFANAGVIANSGIFSGAEILAGLQW-FSLPFGAFIGASL 178

Query: 117 LLFTFYFRSG---HRNLIVLLLLGVILGQLFSSIASFFVMLMDPNDFASVQANMFASFNN 173
            +      SG   +  +  +LL GV    +F ++ S  +    P   ASV      SF  
Sbjct: 179 SVLIVLALSGLGLNSQVERMLLSGVATSFMFGALTSLLLYFASPQATASVLFWSLGSFAK 238

Query: 174 VNTKLVYVVSPLLLLACVLLFRQHRVLDVFWLDKDNAVSLGVDVHKVTRNVLLISALLIS 233
            +  L+ + + ++L++  ++    R +       + A +LGV+V K+  N+LL+ +L+ +
Sbjct: 239 ASWSLLILPTIVVLVSFFIILGWKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITA 298

Query: 234 ISTALVGPILFFGLLVTNLTREWFRSYRHSTLLLA---------TSAMSVCALLSGQWII 284
           I  A  G I F GL++ +  R  F   R   LL A            ++ C LL  Q + 
Sbjct: 299 ILVATCGGIGFVGLMIPHTVRLLFPG-RQPILLTALVGGLFMVWIDVLARC-LLGNQEL- 355

Query: 285 EKVFHFGTTLSVVINFIGGIYFLSLLLRNKV 315
                    + ++   IG  +FL +L R KV
Sbjct: 356 --------PVGIITASIGSFFFLLILRRRKV 378