Pairwise Alignments

Query, 316 a.a., iron(III) ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., Vitamin B12 transporter, permease component (fecCD-like) (from data) from Shewanella sp. ANA-3

 Score = 80.5 bits (197), Expect = 6e-20
 Identities = 82/307 (26%), Positives = 135/307 (43%), Gaps = 41/307 (13%)

Query: 38  RVPKVLAMVFAGIAIAQSSLAFQTITHNRILTPSIMG------FDALYMFTQVLVVVLFG 91
           R+P+++    AG  ++ +    QT+T N +  P + G      F A+ M T      LFG
Sbjct: 85  RLPRIILAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFTGSGLFG 144

Query: 92  GMSSIAMNVYWNFSLSVAAMLSFSTLLFTFYFRSGHRNLIVL--------------LLLG 137
              +IA +  ++ S + A +L FS L F  +  +    LIVL              LL G
Sbjct: 145 NAGTIANSGIFSGSGTFAGLLWFS-LPFGAFIGASLSVLIVLALAGLGLKSQVERMLLSG 203

Query: 138 VILGQLFSSIASFFVMLMDPNDFASVQANMFASFNNVNTKLVYVVSPLLLLACVLLFRQH 197
           V    +FS++ S  +    P   ASV      SF   +  L+ + S ++LL+  ++    
Sbjct: 204 VATSFMFSALTSLLLYFASPQATASVLFWSLGSFAKASWSLLVLPSLVVLLSFFIILGWK 263

Query: 198 RVLDVFWLDKDNAVSLGVDVHKVTRNVLLISALLISISTALVGPILFFGLLVTNLTREWF 257
           R +       + A +LGV+V K+  N+LL+ +L+ +I  A  G I F GL++ +  R  F
Sbjct: 264 RQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPHTVRLLF 323

Query: 258 RSYRHSTLLLA---------TSAMSVCALLSGQWIIEKVFHFGTTLSVVINFIGGIYFLS 308
              R   LL A            ++ C LL  Q +          + ++   IG  +FL 
Sbjct: 324 PG-RQPILLTALVGGLFMVWIDVLARC-LLGNQEL---------PVGIITAAIGSFFFLL 372

Query: 309 LLLRNKV 315
           +L R K+
Sbjct: 373 ILRRRKL 379