Pairwise Alignments

Query, 312 a.a., iron(III) ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  111 bits (277), Expect = 3e-29
 Identities = 84/316 (26%), Positives = 161/316 (50%), Gaps = 13/316 (4%)

Query: 4   LLLVLVVISFCSLFVGVGNLSLAALFQG-------DESAWQLLLTSRVPRLLAILLSGAG 56
           L++ +V ++  +L VG  +LS+A ++Q        + +   LL   R+PR+L  +L+GA 
Sbjct: 30  LMVAVVALALYALTVGSYSLSVAQVWQALLAPEQVNSTMRNLLWELRLPRVLLAVLAGAA 89

Query: 57  LSIAGLIMQQVSQNRFASPSTSGTIECAMLGYVLSLVLFGHGQNLWLIFGVSMLGTLVFV 116
           +S+AGL+MQ +++N  A+P   G    A +  +L +VL+     L      ++ G L   
Sbjct: 90  MSLAGLLMQSLTRNPLAAPGLVGVESGASVTMLLIIVLWPALLPLEFYPLAALAGGLAVA 149

Query: 117 FFIQRIQFKNVIF---VPLIGIIFGNVIDSLATF-IAY-KYDAIQNLSGWAVANFANLLK 171
           FF+  + ++  I    + L+G+    ++ ++A   I Y   D +++   W   +      
Sbjct: 150 FFVALLSWRQGISPLRLILVGVGLTAMLSAVADLLITYGNIDQVESALMWLGGSLHRASW 209

Query: 172 GDFELLYIAIPVAIFSYLYAAR-ISAVGMGKDFATNLGLNYQQVMIIGVALVSIMSATVV 230
                L + + VA    L+  R ++ + +G+  A + GLN   +M+  +    +++A  V
Sbjct: 210 PQVHSLGLWLLVAGVPLLFCHRQLNLLQLGEKVALSRGLNVTWIMVSLLLCSVMLTAAAV 269

Query: 231 MIVGQLPFLGLIVPNLVSLYYGDNLRKNIPRTAIFGAMFVLLCDLVGRVIIFPYEVPISM 290
             VG + F+GL+ P+L     GD     IP +A+ GA+ VL  D +GR ++ P ++P  +
Sbjct: 270 ANVGTMTFVGLVAPHLARQMAGDRHGALIPLSALVGALLVLAGDTLGRGLLPPLQLPAGL 329

Query: 291 IISILGGSVFIALILR 306
           +++I+G    I L+ R
Sbjct: 330 VVAIIGAPYLIVLLAR 345