Pairwise Alignments

Query, 312 a.a., iron(III) ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., transport system permease protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  115 bits (288), Expect = 1e-30
 Identities = 85/300 (28%), Positives = 144/300 (48%), Gaps = 12/300 (4%)

Query: 20  VGNLSLAALFQGDESAWQLLLTSRVPRLLAILLSGAGLSIAGLIMQQVSQNRFASPSTSG 79
           V N  L A +  D     ++   RV R L     GA L+++G+++Q +  N  A P   G
Sbjct: 45  VANKVLGAGYALDPIDEGIIWNYRVARALVAASCGASLAVSGVVLQSLLLNALADPYILG 104

Query: 80  TIECAMLGYVLSLVLFGHGQNLWLIFGVSMLGTLVF--VFFIQRIQFKNVIFVPLIGIIF 137
               A  G V   VL   G  + L  G  +   L F  V FI     +    + L GI  
Sbjct: 105 ISAGASSGAVAVAVLGLGGGLVSLSVGAFLGAVLAFALVSFIALKAGRGPAAIILAGIAG 164

Query: 138 GNVIDSLATFIAYKY---DAIQNLSGWAVANFANLLKGDFELLYIAIPVA----IFSYLY 190
             + ++L +F+  K    D  + +  W + N + +   D  L   A+PVA    +    Y
Sbjct: 165 SQLFNALTSFVVTKVATADQARGIMFWLLGNLSGVRWPDVSL---AVPVALGGLVICLFY 221

Query: 191 AARISAVGMGKDFATNLGLNYQQVMIIGVALVSIMSATVVMIVGQLPFLGLIVPNLVSLY 250
           A  + A   G D A +LG+  ++V I+ +A+ +  +AT+V IVG + F+GL++P++  L 
Sbjct: 222 ARALDAFAFGADSAASLGIPVRRVYIMMIAIAAGTTATMVSIVGSIGFVGLVIPHVARLT 281

Query: 251 YGDNLRKNIPRTAIFGAMFVLLCDLVGRVIIFPYEVPISMIISILGGSVFIALILRGQRH 310
            G    K +P  A+ GA+F++  D++ R II    +PI ++ +++G   F  +++R   H
Sbjct: 282 VGVRHNKVLPAAALIGAIFMIAADILSRKIIPGQVLPIGVMTALVGAPAFALILMRRPAH 341