Pairwise Alignments

Query, 312 a.a., iron(III) ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., Fe3+ ABC transporter, permease protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  103 bits (257), Expect = 5e-27
 Identities = 75/317 (23%), Positives = 165/317 (52%), Gaps = 18/317 (5%)

Query: 4   LLLVLVVISFCSLFVGVGNLSL----AALFQGD--ESAWQLLLTSRVPRLLAILLSGAGL 57
           L+ + V +    L VG  N+ +    AAL  G+   +  +++L  R+ + +  LL+GA L
Sbjct: 12  LITLTVGLFLLDLAVGAVNIPIRDVWAALTGGNCSRATEKIVLNIRLIKAIVALLAGAAL 71

Query: 58  SIAGLIMQQVSQNRFASPSTSGTIECAMLGYVLSLVLFGHGQNLWLIFGVSMLGTLVFVF 117
           S++GL MQ + +N  A P   G    A LG  L +VL G G ++  I G + +G  V + 
Sbjct: 72  SVSGLQMQTLFRNPLAGPYVLGISSGASLGVAL-VVLAGIGSSIG-IAGAAWVGAAVVLL 129

Query: 118 FIQRI--QFKNVIFVPLIGIIFGNVIDSLATFIAY--KYDAIQNLSGWAVANFANLLKGD 173
            I  +  + K+++ + ++G++F + + ++   + Y  K ++++    W +    ++  G 
Sbjct: 130 VITAVGQRIKDIMVILILGMMFSSGVGAVVQILQYLSKEESLKAFVIWTMGALGDVTSGQ 189

Query: 174 FELLYIAIPVAIF-SYLYAARISAVGMGKDFATNLGLNYQQVMIIGVALVSIMSATVVMI 232
             +L  ++   +  + L    ++ +  G+++A  +GLN ++   +     ++++ T+   
Sbjct: 190 LLILVPSVFAGLLLAVLTIKPLNLLLFGEEYAVTMGLNIRRSRSLLFLSTTLLAGTITAF 249

Query: 233 VGQLPFLGLIVPNLV-SLYYGDNLRKNIPRTAIFGAMFVLLCDLVGRVIIFPYEVPISMI 291
            G + F+GL +P++   L+   +    +P T + GA  +LLCD++ ++    + +PI+ I
Sbjct: 250 CGPIGFIGLAMPHVTRMLFQNSDHHVLLPGTILSGASILLLCDIISKI----FTLPINAI 305

Query: 292 ISILGGSVFIALILRGQ 308
            ++LG  + + ++LR +
Sbjct: 306 TALLGIPIVVWVVLRNK 322