Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  220 bits (560), Expect = 1e-61
 Identities = 133/348 (38%), Positives = 200/348 (57%), Gaps = 4/348 (1%)

Query: 205 GLIISFITSLVIITNLRSRVAYLKDRMSS----AAANLSLRTRLELDGNDELCDIGKSFN 260
           GL+I+ +  L++   +RS V  L++ +++    A+    L   L+  G DE+  + + FN
Sbjct: 197 GLVITLLMGLLLTLIVRSIVGPLQETVNAMANIASGESDLTRTLDTHGQDEVTQLARHFN 256

Query: 261 AFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVS 320
           AF  K+   + ++  ++  L   +S +   A   Q     Q  +   VATAI+E+   V 
Sbjct: 257 AFTAKLRQVVTQLQASASALGQSSSELGNDAAQAQERSQQQSQQMELVATAINEVTYGVQ 316

Query: 321 EIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGISS 380
           ++A NA  AA+  + A   + +G+  +     +I  L   +D A +V+ +LA++   I S
Sbjct: 317 DVAKNAEHAANEMRDAESQAQQGQVNIDGSLQQIDRLSQTIDQAVEVIRTLASESTQIGS 376

Query: 381 TLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINR 440
            L+ IRSI+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA R+  ST EIQ +I R
Sbjct: 377 VLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQKSTAEIQAMIER 436

Query: 441 LQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQSTV 500
           LQT S  AV+ +      S + +E +  A  SL  I   +  +N  N  +A+AT +Q+ V
Sbjct: 437 LQTHSEAAVKVIGDSSRASQLTIEQAGLAGASLNAIGQALRNLNSLNASIASATLQQAHV 496

Query: 501 VEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFEL 548
           VEDIN+NV     L+  T+  A++ S+AS  L+ LS QL+ L+  F +
Sbjct: 497 VEDINQNVTQAAGLSHSTAMAAEQSSQASTRLKALSEQLNGLLTQFRV 544