Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  218 bits (556), Expect = 4e-61
 Identities = 150/535 (28%), Positives = 275/535 (51%), Gaps = 11/535 (2%)

Query: 14  IAVAIPAIALLFVAFTSLNTMSVMQAQSNSLYANTAAPMRAMAEATSRIPRMRVGIDMML 73
           +  A+ A+ ++ +   + N MSV++  S  +       +  +A     + RMR+    +L
Sbjct: 14  LGFAVIALLVVILGVFAANRMSVIRQASLEMEQTQVPSVGYLANVLENVLRMRILSFRIL 73

Query: 74  LQETALKDAKGVLKRVEEARTEDIPEMRQAMQVAVDSQVNPELKEQARKLQARFEQMVRE 133
           +           L   E      + ++ +A          P+  E  +   A  E+ ++ 
Sbjct: 74  VNRDPAS-----LTEAESRIGVLVEKLNKANSSYAALPSTPQEAELYKVFSATLEKYLQA 128

Query: 134 ELEPMLQAFANNDMTTAQNIYRDKYAPTYGEMRKQANQILDTLLQQAEQQNHASVESFEA 193
           + E ML     N     +     +       M +Q N+++   +  A + +  + E +++
Sbjct: 129 QKE-MLDLSRQNKADELRTHINTRIKEGTDLMGEQLNKLIAINVAGASESSAKAGEHYDS 187

Query: 194 GRTKQMVIIAAGLIISFITSLVIITNLRSRVAYLKDRMSSAA--ANLSLRTRLELDGNDE 251
             T  +++  +  + + + +L++    RS VA L   + +A   A+ +L   +  DG DE
Sbjct: 188 AITGIIIVSISAALATVVLALLLT---RSIVAPLNRALEAARTIASGNLVQVIADDGKDE 244

Query: 252 LCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATA 311
              + ++       +  +IE++A ++ +L   A  +S     +      Q +   Q ATA
Sbjct: 245 PGRLLQALATMQVSLRQTIEQIAGSATQLGAAAQELSAVTQESSRGLQQQHNEIEQAATA 304

Query: 312 IHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSL 371
           ++E+ A V E+A NA   ++ + Q+T  + EG+  V E  + IQT+ +++     ++  L
Sbjct: 305 VNEMTAAVEEVARNAVSTSEASNQSTQAAQEGRTRVVETVDAIQTMTHDVQATASMIEGL 364

Query: 372 ATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAAST 431
           A Q   I   LD IR+I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA R+A ST
Sbjct: 365 AVQGRDIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTAQST 424

Query: 432 EEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVA 491
           +EI++++  +Q  + +AV++M++   ++   +E +  A  +L +I   I QIN++N+ +A
Sbjct: 425 QEIEKMVAGIQNGTGQAVQSMQQSNQRTQSTLEMARAAGVALEQITQSIHQINERNLVIA 484

Query: 492 TATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSF 546
           +A+EEQ+ V  +++RN+ +I  L T+++  A + S A+  L RL+  L+ +V  F
Sbjct: 485 SASEEQAQVSREVDRNLVNIRDLATQSASGAKQTSDATHELSRLAVGLNAMVARF 539