Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  221 bits (562), Expect = 7e-62
 Identities = 130/392 (33%), Positives = 218/392 (55%), Gaps = 6/392 (1%)

Query: 163 GEMRKQANQILDTLLQQAEQQNHASVESFEAGRTKQMV---IIAAGLIISFITSLVI--- 216
           G+++K   +++D L    +  +    E  +A   +++    ++ +G++++FI +L++   
Sbjct: 169 GDLQKAYRKVMDQLTIMIDSNDRQISEDAKAATQQEVTAKTVLYSGIVVAFIAALLLGMF 228

Query: 217 ITNLRSRVAYLKDRMSSAAANLSLRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAEN 276
           I+ L SR   +    +   A   L   +  +  DE   + K+       +  +I+++A  
Sbjct: 229 ISRLISRPIAVAVDCAQRIAQGDLTQHITSNSRDEAGQLLKALGDMQTSLKTTIQQIASA 288

Query: 277 SKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQA 336
           S +LA+ A  ++            Q D   Q ATA+ E+ + V E+A NA   +  ++  
Sbjct: 289 SDQLASAAEELTAVTDDGSRALIRQNDEIQQAATAVTEMTSAVEEVARNAVSTSQASQST 348

Query: 337 TLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLA 396
           +  + EG+         I T   E+ ++T +V  LA Q+  I   LD IR I+EQTNLLA
Sbjct: 349 SSQASEGRDQARSAVQAINTATQEITSSTGLVKDLAVQVRDIGKVLDVIRGIAEQTNLLA 408

Query: 397 LNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGR 456
           LNAAIEAARAGEQGRGFAVVADEVR LA+R+ AST EI+ +I+ +Q  +  AV+AM K +
Sbjct: 409 LNAAIEAARAGEQGRGFAVVADEVRALAARTQASTGEIESMIHAVQDRADSAVDAMGKSQ 468

Query: 457 SQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTT 516
           +      + +    ++L +I   I QIND+N+ +ATA+EEQ+ V  +++RN+ +I  L+T
Sbjct: 469 ALVTETQDLARATGEALEQIADNISQINDRNLVIATASEEQAHVAREVDRNLVNIQDLST 528

Query: 517 ETSHVADELSRASASLQRLSSQLDKLVGSFEL 548
           +T+  A++ + +S  L  L+   + LVG F L
Sbjct: 529 QTAAGANQTNASSQELSNLALSFNSLVGRFRL 560