Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  233 bits (593), Expect = 2e-65
 Identities = 143/352 (40%), Positives = 204/352 (57%), Gaps = 7/352 (1%)

Query: 201 IIAAGLIISFITSLVIITNLRSRVAYLKDRMSSAAANLS-LRTRLELDGNDELCDIGKSF 259
           I A  L++  +  L++   +   +  +KD +   AA    L  RL +   DEL  +  SF
Sbjct: 211 IAAVVLLVIAVVGLLLANAILRPLHLMKDNLDDIAAGEGDLTRRLTITSQDELGQLAGSF 270

Query: 260 NAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATV 319
           N F+DK+H  + ++ + + +L  + + VS++A  ++     QR  T QVATAI+E+ +  
Sbjct: 271 NRFVDKIHGLVRQITDMTSQLTGLVTQVSEQAQRSEQAMERQRHETDQVATAINEMSSAA 330

Query: 320 SEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGIS 379
            E+A +A  AA  A+Q        K+VV     +I  LVN++ ++   + SL   +  I 
Sbjct: 331 QEVARSAQGAAVAAQQTDEEGQSAKRVVAGSIQQIHALVNDIRSSGVSLDSLQQDVASIV 390

Query: 380 STLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVIN 439
           S L  IRSI+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LASR+  ST+EIQ +I+
Sbjct: 391 SVLGVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTQEIQGMID 450

Query: 440 RLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQST 499
           RLQ+ +  AVEAM +     D   E + +A  SL  +   I  IN  N Q+A+A EEQ+ 
Sbjct: 451 RLQSGTHAAVEAMRRSSEAGDGTSERANEAGASLDTMAQLIGTINSMNAQIASAAEEQTA 510

Query: 500 VVEDINRNVEDINQLTTETSHVADEL---SRASASLQRLSSQLDKLVGSFEL 548
           V E+INR+V   +Q+      VADE    ++ S SL  L  +L KLVG F +
Sbjct: 511 VAEEINRSV---HQIAVAVDSVADETQLGAQTSRSLADLGQRLGKLVGQFRI 559