Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 649 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N1B4

 Score =  237 bits (605), Expect = 9e-67
 Identities = 144/348 (41%), Positives = 202/348 (58%), Gaps = 4/348 (1%)

Query: 205 GLIISFITSLVIITNLRSRVAYLKDRMSSAAANLS----LRTRLELDGNDELCDIGKSFN 260
           GL ++ +  ++++   R  V  ++   ++  A  S    L  RL+    DEL D+ + FN
Sbjct: 301 GLAVALVCLMLVVLLARGLVRPIRQVTAALVAIGSGGGDLTHRLDSSRADELGDLARGFN 360

Query: 261 AFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVS 320
            F++     I EV   S+ L T    V++    T      Q++ T  VATA+HE+G TV 
Sbjct: 361 RFLESQRDMIGEVLATSERLRTAVGQVARVVDNTAERSGRQQEMTDMVATAVHEMGLTVQ 420

Query: 321 EIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGISS 380
           EIA NA  AA  ++ A   + + + VVG     I+++ +E+  A   V  LA Q+  I  
Sbjct: 421 EIAQNAGNAAVASQTARDEALQARVVVGGSIRHIESMSDEIGIAAGAVGELAHQVASIDQ 480

Query: 381 TLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINR 440
            L  IR ISEQTNLLALNAAIEAARAG+ GRGFAVVADEVRTLA R+ +ST+EIQQ+I  
Sbjct: 481 VLAVIRGISEQTNLLALNAAIEAARAGDMGRGFAVVADEVRTLARRTQSSTDEIQQMIGS 540

Query: 441 LQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQSTV 500
           L+  +  AV +M  G++ +   VE S +   SLT I  Q+++I+D N QVATATEEQS V
Sbjct: 541 LKQGAENAVSSMHAGQAATGTGVESSQRTGASLTAITGQVERISDMNHQVATATEEQSAV 600

Query: 501 VEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFEL 548
            E+INRNV+ I+ L   T+            LQRL+  L + +G F+L
Sbjct: 601 TEEINRNVQGISDLARATAGEVRACREDCQMLQRLADDLARQMGGFKL 648