Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  216 bits (549), Expect = 3e-60
 Identities = 138/371 (37%), Positives = 216/371 (58%), Gaps = 16/371 (4%)

Query: 185 HASVESFEAGRTKQMV--IIAAGLIISFITSLVIITNLRSRVAYLKDRMSSAAANLS--- 239
           +A++ SF   RT  +V  + A G+I+  +  L     +R  +  L D M  A AN++   
Sbjct: 268 YAALASF---RTSAVVAALTAVGVILLLLGML-----MRVLMRPLTD-MGRAMANIAEGE 318

Query: 240 --LRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSN 297
             L  RL +   DE  ++  +FN F++++H SI EV+  ++++  +A+ V   ++ + +N
Sbjct: 319 GDLTRRLAVQSKDEFGELASAFNRFVERIHTSIREVSSATQQVNEVAARVLAASNSSMAN 378

Query: 298 CASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTL 357
              Q  RT  VA AI+ELGA   EIA NAA A+  A  A   + +G++VV +    ++ L
Sbjct: 379 SDEQASRTNSVAAAINELGAAAQEIARNAADASQQASGARHQAEDGRQVVEQNIAAMREL 438

Query: 358 VNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVA 417
             ++  +   + +L  +   I   L+ I+ ISEQTNLLALNAAIEAARAGE GRGFAVVA
Sbjct: 439 SAKISASCAQIEALNAKTVDIGQILEVIKGISEQTNLLALNAAIEAARAGEAGRGFAVVA 498

Query: 418 DEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEIN 477
           DEVR LA R+ +S +EIQQ+I +LQ  +  +V+ M + + QS+  V  + +A + L E+ 
Sbjct: 499 DEVRNLAHRTQSSAQEIQQMIEQLQVGAGASVQTMTESQRQSESSVSIADRAGERLGEVT 558

Query: 478 SQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSS 537
            +I +I+  N  VATATEEQ+ V+E +N ++ +IN L  +         RA   L + + 
Sbjct: 559 QRIGEIDGMNQSVATATEEQTAVIESLNMDITEINTLNQQGVENLQSTLRACGDLDQQAR 618

Query: 538 QLDKLVGSFEL 548
           +L +LV SF +
Sbjct: 619 RLKQLVDSFRI 629