Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  211 bits (538), Expect = 4e-59
 Identities = 131/350 (37%), Positives = 195/350 (55%), Gaps = 3/350 (0%)

Query: 199 MVIIAAGLIISFITSLVIITNLRSRVAYLKDRMSSAAANLSLRTRLELDGNDELCDIGKS 258
           + ++  GL+ +   S ++I  L S +  LKD M     +  L+ R+ LD  DE+  +  +
Sbjct: 143 VAVLMLGLLAA---SQLLIRFLLSHLNTLKDVMLHVERSGDLQARVPLDSRDEVGQMASA 199

Query: 259 FNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGAT 318
           FNA        +  VA+ +  L   AS ++   +        Q+  T Q ATAI+E+ AT
Sbjct: 200 FNAMQGGYQRVVSTVAQAAARLDEGASRLATSMNDVHKGMRGQQGETDQAATAINEMSAT 259

Query: 319 VSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGI 378
           V +IA +A    D ++ A   +G+G +VVG V+  I +L   +    +++  LA     I
Sbjct: 260 VHQIAEHARETRDQSQNADRLAGDGHRVVGRVEKSISSLSQGVQQTGEMIEQLAADSQRI 319

Query: 379 SSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVI 438
           +  ++ I SI+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA R   ST+EI Q+I
Sbjct: 320 NGVVNVIHSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAKRVQDSTDEITQMI 379

Query: 439 NRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQS 498
           + LQ+ +  AVE M++   ++D  V  +  A Q+L  I   + Q+ + N Q+A A E+QS
Sbjct: 380 SGLQSMTRDAVEFMQESSLKADDCVREAHDAAQALEAIADAVAQMRESNTQIAVAAEQQS 439

Query: 499 TVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFEL 548
            V E++NR+V  I  +T  T       +  SA L  LS+ L + +G   L
Sbjct: 440 QVAEELNRSVTGIRDVTERTVEQTVSSASTSAELAALSADLSRAIGQLRL 489