Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  222 bits (565), Expect = 3e-62
 Identities = 137/348 (39%), Positives = 200/348 (57%), Gaps = 4/348 (1%)

Query: 205 GLIISFITSLVIITNLRSRVAYLKDRMSS----AAANLSLRTRLELDGNDELCDIGKSFN 260
           GL+IS I ++++   +RS V  L+  M++    A+    L   L++ GNDEL  +G+ FN
Sbjct: 197 GLLISAIMAVLVAILIRSIVRPLRHTMAAMANIASGEADLTRTLDVSGNDELTTLGRDFN 256

Query: 261 AFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVS 320
            F  K+   + ++ E +  L   + S+SQ +         Q  +  QVATAI+E+   V 
Sbjct: 257 RFTQKLRTVVGQLFETAGALDQSSRSLSQLSGQAHEQSQQQMLQMEQVATAINEVTYAVQ 316

Query: 321 EIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGISS 380
           E+A NA  A+     A   +G+G++ +     +I  L   +  A  V+ SLA +   I S
Sbjct: 317 EVAKNAEHASSEVGSAENQAGQGQRNIETSLQQIDELSATIGQAVDVIQSLADETTKIGS 376

Query: 381 TLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINR 440
            L+ I SI+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA R+  ST EI  +I R
Sbjct: 377 VLEVIGSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQQSTAEIHGMIER 436

Query: 441 LQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQSTV 500
           LQ  S  AV  + +    S + VE +++A +SL EI   +  ++  N  +A+AT +QS V
Sbjct: 437 LQKNSGAAVNVIMESNRASQLTVEQASQAGESLGEIAQALRNLSGLNASIASATLQQSHV 496

Query: 501 VEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFEL 548
           VEDIN+NV     L  E++  A++ S A   L  L+ QL++L+  F +
Sbjct: 497 VEDINQNVTQAAGLAQESTLAAEQSSEAGKQLGELAGQLNRLLSQFRV 544