Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  214 bits (544), Expect = 1e-59
 Identities = 141/452 (31%), Positives = 241/452 (53%), Gaps = 12/452 (2%)

Query: 108 VDSQVNPELKEQARKLQARFEQMVREELEPMLQAFANNDMTTAQ---NIYRDKYAPTYGE 164
           ++ Q   EL++  R L+ R  ++     +P+  A A  D         +   +++   G+
Sbjct: 224 IELQFRAELEQSIRLLKRRSPELAARISDPITAATAAMDSFRGDLHAYVKGTEFSVQQGQ 283

Query: 165 MRKQANQILDTLLQQAEQQNHASVES-----FEAGRTKQMVIIAAGLIISFITSLVIITN 219
                  ++ + L +A+ +   ++++     ++A   ++ V+IA  +I+  +  L    +
Sbjct: 284 ALSARGNVVVSGLYKAQDEIQTALQNELNTRYDALVLQREVVIAMCVIMGLLL-LYAFCS 342

Query: 220 LRSRVAYLKDRMSSAAANLS---LRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAEN 276
           +   +    D +      L    L  R+ +   DE+ DI    N   D    SI  +   
Sbjct: 343 IYRALRLTIDSLLGVTRRLGEGDLSARVAVVSKDEVADIANGLNLMADAFASSISHMDRT 402

Query: 277 SKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQA 336
           S EL  +AS +     + + +  +Q+  T QVATAI+E+ A+V+++A N   AA  A +A
Sbjct: 403 SYELTDVASRLGASIGLAKQSMNAQQAETEQVATAINEMTASVADVAQNTEGAALAADEA 462

Query: 337 TLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLA 396
              S  G +++ +  + IQ L  E++ + Q V +LA     I   +  I +I++QTNLLA
Sbjct: 463 NTASRNGLRIMHQAHSTIQALAEEVELSAQKVQALALHSQSIGGVIQVISTIADQTNLLA 522

Query: 397 LNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGR 456
           LNAAIEAARAGEQGRGFAVVADEVRTLASR+ ASTEEI+ +I +LQ+ +  AV+ M+ G+
Sbjct: 523 LNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTEEIRGIIQQLQSATDAAVQQMQAGQ 582

Query: 457 SQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTT 516
            ++   +  ++ A+ SL+ I+  +++I + N Q+A+A  +Q  V EDINRNV +I   + 
Sbjct: 583 QKAHACISAASDASGSLSSISQGVERIVEMNTQIASAAVQQHAVSEDINRNVMEIRNSSG 642

Query: 517 ETSHVADELSRASASLQRLSSQLDKLVGSFEL 548
                 D  +  +  L R++S +  +V  F+L
Sbjct: 643 TLMLGIDNNAVTADELARVASDMRNVVARFKL 674