Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  222 bits (566), Expect = 2e-62
 Identities = 152/552 (27%), Positives = 286/552 (51%), Gaps = 15/552 (2%)

Query: 1   MIINKFSLKWMLAIAVAIPAIALLFVAFTSLNTMSVMQAQSNSLYANTAAPMRAMAEATS 60
           M + K ++     +   + ++ +  + + +L  MS ++    ++  N    MR + +   
Sbjct: 1   MNLRKLTIARRAGLGFTLISLLVALLGWFALAQMSTIRQSEVAVETNWLPSMRVVNDIRE 60

Query: 61  RIPRMR-VGIDMMLLQETA-LKDAKGVLKRVEEARTEDIPEMRQAMQVAVDSQVNPELKE 118
            + R+R + + M L  + A +   +G +    + R  D+ +    ++  VD+     L +
Sbjct: 61  IMLRIRTISLRMALDTDPASIPTYRGQM----DVRLGDLDKKLSVLKTFVDTPEEKSLTD 116

Query: 119 QARKLQARFEQMVREELEPMLQAFANNDMTTAQNIYRDKYAPTYGEMRKQANQILDTLLQ 178
           Q      ++    R  L+      +  D      +             KQ   + D  L 
Sbjct: 117 QFMVTVGQY----RSALDRSFALASQGDSVGLNKLLLVDMKQIVDGSGKQLGDLADFYLT 172

Query: 179 QAEQQNHASVESFEAGRTKQMVIIAAGLIISFITSLVIITNLRSRVAYLKDRMSSA--AA 236
           Q + +  ++   ++  R    ++I   +I +  T  + +   RS V  L+  +++A   A
Sbjct: 173 QVDAEGKSAGAQYDKSRD---IVIIFVVIAALCTIGLALWLTRSIVGPLQRAVTAAEQVA 229

Query: 237 NLSLRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQS 296
           N  L   +E+DG DE+  + ++       +  ++  +  ++ +LA+ A+ ++     +  
Sbjct: 230 NGDLTHTIEVDGEDEVTRLLRALAMMQVNLREAMRHIGSSATQLASAATELNSVTEDSYR 289

Query: 297 NCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQT 356
               Q     Q ATAI+E+ + V E+A NA   +D + Q++  +  G+  V E    IQT
Sbjct: 290 GLNQQNAEIDQAATAINEMTSAVEEVARNAVSTSDASNQSSTSALAGQTRVIETVQSIQT 349

Query: 357 LVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVV 416
           L + +   + +V +LA Q   I   LD IRSI+EQTNLLALNAAIEAARAGE GRGFAVV
Sbjct: 350 LTDNVQATSTLVQNLANQSQDIGKVLDVIRSIAEQTNLLALNAAIEAARAGESGRGFAVV 409

Query: 417 ADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEI 476
           ADEVR LA R+  ST EI  +++ +++ S +A+++M   R+++D  +  +  A +SL+EI
Sbjct: 410 ADEVRALAHRTQQSTLEIDSMVSAMRSGSAQALDSMNTSRARADSTLALAKGAGESLSEI 469

Query: 477 NSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLS 536
            S I+QI+++N+ +A+A EEQ+ V  +++RN+ +I  L+ +++  A+++S +S  L RL+
Sbjct: 470 TSSINQISERNLVIASAAEEQAQVSREVDRNIVNIRDLSMQSTQGANQISASSHELSRLA 529

Query: 537 SQLDKLVGSFEL 548
           + L+++V  F++
Sbjct: 530 ADLNQVVSRFKV 541