Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  223 bits (568), Expect = 1e-62
 Identities = 151/495 (30%), Positives = 267/495 (53%), Gaps = 36/495 (7%)

Query: 77  TALKDAKGVLKRVEEARTEDIPE-MRQAMQVAVDSQVNPELKEQARKLQARF-------- 127
           TAL      L R+ +A+ +   E MRQ+        +N EL E+A+K+ A +        
Sbjct: 61  TALTTHNRGLYRLLDAKDKATAEKMRQS--------INGEL-ERAQKVYAIYRATPLEDD 111

Query: 128 EQMVREELEPMLQAFANNDMTTAQNIYRDKYAPTYGEMRKQANQI-----------LDTL 176
           E+   ++ + ++ A+    M+ +QNI+  + A    + R + N +           L  +
Sbjct: 112 ERAAGDQYDALMPAY----MSASQNIFDLQQAGKLEDARNRLNALAEGEFNKARGYLQIM 167

Query: 177 LQQAEQQNHASVESFEAGRTKQMVIIAAGLIISFITSL---VIITNLRSRVAYLKDRMSS 233
           +   ++Q     E+ +  ++  + ++ AG++I+F+ ++   ++IT + +R       ++ 
Sbjct: 168 IDSNKRQIKEGAEAADRLQSTSVFMLTAGIVIAFVVAIMLGILITRMITRPLRSAIEVAQ 227

Query: 234 AAANLSLRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHM 293
             A+  L   +     DE   +  +       +  +I+E++  S +LA+ A  +      
Sbjct: 228 RIASGDLTQSVSSTRGDEAGHLLNAIGTMQGNLKRTIQEISSASDQLASAAEELGAVTEE 287

Query: 294 TQSNCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNR 353
           +      Q D   Q ATA++E+ A V E+A NA   ++ +K     +  G+  V      
Sbjct: 288 STRGLTRQNDEIQQAATAVNEMTAAVEEVARNAVSTSEESKSLATDAANGRGQVDNTVKG 347

Query: 354 IQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGF 413
           I T+V+E+  +T  V++LA  +  IS  L+ IRSI+EQTNLLALNAAIEAARAGEQGRGF
Sbjct: 348 IGTMVSEITESTGSVTTLAGHVRDISKVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGF 407

Query: 414 AVVADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSL 473
           AVVADEVR LA R+ AST EI+ +I  +Q+ +  AV AM K  + +    E + +A  +L
Sbjct: 408 AVVADEVRALAHRTQASTVEIEGMIGTVQSGADGAVAAMSKSLATATNTQELAQRAGSAL 467

Query: 474 TEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQ 533
            +I S +  IN++N+ +A+A+EEQ+ V  +++RN+ +I +L+ +++  A++ S +S  L 
Sbjct: 468 EKITSGVGMINERNMVIASASEEQAQVAREVDRNLVNIQELSAQSAAGANQTSASSQELS 527

Query: 534 RLSSQLDKLVGSFEL 548
           RL++  + +V  F+L
Sbjct: 528 RLATSFNTMVAQFKL 542