Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 653 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  228 bits (581), Expect = 5e-64
 Identities = 138/350 (39%), Positives = 204/350 (58%), Gaps = 1/350 (0%)

Query: 199 MVIIAAGLIISFITSLVIITNLRSRVAYLKDRMSSAAANLSLRTRLELDGNDELCDIGKS 258
           + I+   LI+    + VII N++  V  + +R   A +   L  R    G DE  +I ++
Sbjct: 304 VAIVVLMLIVVLWLASVIIRNIKVAVVDV-NRTLMALSTRDLTARTRYIGKDEFGEISRN 362

Query: 259 FNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGAT 318
            +    ++   I E+   + ++AT A   S  A  T  N A QR  T QVATAI E+ AT
Sbjct: 363 LDNMAHQISEVISEIGSATAQVATAAEQSSAVALQTNQNVAQQRQGTDQVATAISEMSAT 422

Query: 319 VSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGI 378
           V ++A +   AA+++++    + +GK  +      IQ L  + +  ++++  L  + N I
Sbjct: 423 VKDVARSTTDAAEMSQRVNSSTVQGKTEIDNTIGLIQELSVQAEETSRIIDELKGESNSI 482

Query: 379 SSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVI 438
           SS LD IR +++QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA ++  ST  IQ++I
Sbjct: 483 SSVLDVIRGVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAKKTQDSTVSIQKMI 542

Query: 439 NRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQS 498
             LQ+ S RA  +M++   ++        +A + L EI   I  I+D+NIQVA+A EEQS
Sbjct: 543 ANLQSGSERAAASMQETLGKAQEGASNVVRAGELLEEIAEGIATISDRNIQVASAAEEQS 602

Query: 499 TVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFEL 548
            V E+I+RNV+DIN L  + S  A++ +  S  L RL+ Q   LVG F++
Sbjct: 603 LVAEEIHRNVDDINSLVIQVSAGAEQTAVTSRELARLAEQQQGLVGRFKV 652