Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  213 bits (542), Expect = 2e-59
 Identities = 136/380 (35%), Positives = 209/380 (55%), Gaps = 4/380 (1%)

Query: 169 ANQILDTLLQQAEQQNHASVESFEAGRTKQMVIIAAGLIISFITSLVIITNLRSRVAYLK 228
           AN  +  +L+Q     +A +  F A     MV++   ++I  +  L+I   ++      +
Sbjct: 254 ANWYVALVLEQ--DSAYAMLAEFRASAITAMVVVV--VVIILLLGLLIRVLMQPLHQMGR 309

Query: 229 DRMSSAAANLSLRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVS 288
                A     L  RL +   DE  ++ +SFN F++++H SI EVA  + +L  +A+ V 
Sbjct: 310 AMRDIADGEGDLTKRLAITSQDEFGELAESFNRFVERIHTSIREVASTAAQLGEVATRVV 369

Query: 289 QRAHMTQSNCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVG 348
           + ++ +  N   Q +RT  VA AI+ELGA   EIA NAA  +  +  A+  + +G+ VV 
Sbjct: 370 KVSNASMGNSDQQANRTESVAAAINELGAAAQEIAQNAARTSQQSSDASGLASDGQNVVQ 429

Query: 349 EVQNRIQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGE 408
           +    +  L  ++  +   + SL  +   I   L+ I SIS+QTNLLALNAAIEAARAGE
Sbjct: 430 QTIKAMNELSGKISESCVNIESLNGKTANIGQILEVITSISQQTNLLALNAAIEAARAGE 489

Query: 409 QGRGFAVVADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAK 468
            GRGFAVVADEVR LA R+  S +++Q +I  LQ  +  AV  M + + QS+  V  +  
Sbjct: 490 AGRGFAVVADEVRNLAHRTQDSAQQVQTMIEELQVGARDAVTNMTESQRQSEDSVGIANL 549

Query: 469 ANQSLTEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRA 528
           A + L  +  +I++IN  N  VA ATEEQ++VVE IN ++  IN L         +   A
Sbjct: 550 AGERLGSVTRRIEEINGMNQSVAAATEEQTSVVESINVDITHINTLNQLGVDNLRQTLEA 609

Query: 529 SASLQRLSSQLDKLVGSFEL 548
             SL+  +++L +LVGSF +
Sbjct: 610 CNSLEEQAARLQQLVGSFRI 629