Pairwise Alignments

Query, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  226 bits (577), Expect = 2e-63
 Identities = 156/493 (31%), Positives = 255/493 (51%), Gaps = 25/493 (5%)

Query: 69  IDMMLLQET---ALKDAKGVLKRVEEARTE-------DIPEMRQAMQVAVDSQVNPELKE 118
           I+  LL+E    A     GV K +++AR +         P+  +    A+D  V   +  
Sbjct: 154 IEAELLKEDNILAFNGIVGVSKLIQQARFQVRGYTYSGRPDFEKDANKAIDDAVTG-INT 212

Query: 119 QARKLQARFEQMVREELEPMLQAFANNDMTTAQNIYRDKYAPTYGEMRKQAN---QILDT 175
            A  + + +  M+++ +  +      N    A   YRD  A +   + K       +L T
Sbjct: 213 LAGDISSTYSPMLQQAIAGL------NGYRAAVGKYRDAQAASKAALDKMTTLGVSMLAT 266

Query: 176 LLQQAEQQNHASVESFEAGRTKQMVIIAAGL--IISFITSLVIITNLRSRVAYLKDRMSS 233
                 +QN +     ++ ++ QM+I A  L  ++  + + VI   + + +    + +  
Sbjct: 267 SNDLITRQNKS--RDADSAKSVQMIIAATALAMVLGILAAWVITRQITTPLQETLEVVER 324

Query: 234 AAANLSLRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHM 293
            A+   L   L +D  DEL  +  +       +   +  + +   ++A+ A  +S     
Sbjct: 325 VASG-DLSRNLNVDRKDELGKLQATIQRMTVSLRELVGGIRDGVTQIASAAEELSAVTEQ 383

Query: 294 TQSNCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNR 353
           T +   SQ+  T QVATA+HE+ ATV E+A NA  A++ A  A   + +G++VV E   +
Sbjct: 384 TSAGVNSQKVETDQVATAMHEMTATVQEVARNAEEASEAAVAADRQARDGERVVNEAIAQ 443

Query: 354 IQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGF 413
           I+ L + + N+++ + +L  + + I S LD I+S++EQTNLLALNAAIEAARAGE GRGF
Sbjct: 444 IERLASAVGNSSEAMGALKQESDKIGSVLDVIKSVAEQTNLLALNAAIEAARAGEAGRGF 503

Query: 414 AVVADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSL 473
           AVVADEVR+LA R+  STEEI+ +I RLQ+ + +A   M+  R  S   VE + +A  SL
Sbjct: 504 AVVADEVRSLAQRTQKSTEEIEALIARLQSGTQQATTVMDSSRELSTSSVELTRRAGGSL 563

Query: 474 TEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQ 533
             I   +  I   N Q+A A EEQS   E+INR++ ++  ++ +TS  ++E + +S  L 
Sbjct: 564 ANITKTVSSIQAMNQQIAAAAEEQSATAEEINRSIINVRDVSEQTSAASEETAASSVELA 623

Query: 534 RLSSQLDKLVGSF 546
           RL + L  LV  F
Sbjct: 624 RLGNHLQVLVSRF 636